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JN564907.1__AEY69566.1__AH2_00055__00055
Bact-VirJN564907.1__AEY69566.1__AH2_00055__00055
Identity
- Accession:
- JN564907 ↗
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Ahduovirus›
Burkholderia_phage_vB_BceS_AH2
TaxID: 1133022
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-120
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23789.2 best | Pre_tape_measure | 97.7 | 8.10e-28 | 100.0% | 73.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.63 | 44.0 | 4.76e-01 | 100.0% | 86.5% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.57 | 32.0 | 3.56e-01 | 73.9% | 69.3% |
| 3b9qA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.56 | 36.0 | 4.00e-01 | 74.8% | 84.3% |
| 4agsA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 35.0 | 3.34e-01 | 72.2% | 85.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3729160 | 7022.1.1.0 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein | 0.58 | 40.0 | 3.47e-01 | 73.0% | 78.4% |
| 3877309 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.58 | 35.0 | 3.87e-01 | 78.3% | 76.7% |
| 3208136 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.57 | 40.0 | 3.42e-01 | 73.0% | 71.3% |
| 3518583 | 7022.1.1.0 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein | 0.56 | 42.0 | 3.41e-01 | 79.1% | 92.7% |
| 4973647 | 604.39.1.26 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › 5TM-5TMR_LYT | 0.54 | 45.0 | 3.75e-01 | 90.4% | 92.2% |
| 3192791 | 7022.1.1.0 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein | 0.52 | 39.0 | 3.33e-01 | 78.3% | 74.6% |
| 4943690 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 37.0 | 3.45e-01 | 76.5% | 81.4% |
| 3836366 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.50 | 43.0 | 3.90e-01 | 96.5% | 97.0% |
| 3929129 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.50 | 39.0 | 3.25e-01 | 96.5% | 45.6% |