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JN564907.1__AEY69570.1__AH2_00060__00060

Bact-Vir

JN564907.1__AEY69570.1__AH2_00060__00060

Identity

Accession:
JN564907 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Ahduovirus› Burkholderia_phage_vB_BceS_AH2

TaxID: 1133022

Cluster

View cluster (247 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-115
PDB
Domain cluster: rep: MW055913.1__QPX62562.1__SEA_WOLLYPOG_9__00009__D49-123
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.68 61.0 5.73e-01 95.8% 95.7%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.67 52.0 5.69e-01 89.6% 100.0%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 46.0 4.72e-01 92.7% 75.8%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 50.0 4.61e-01 92.7% 62.6%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 49.0 4.81e-01 92.7% 73.6%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 49.0 4.49e-01 94.8% 63.2%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 54.0 4.48e-01 94.8% 75.0%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 51.0 4.83e-01 94.8% 72.6%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 53.0 3.74e-01 95.8% 35.4%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 45.0 4.51e-01 90.6% 76.8%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.60 46.0 4.41e-01 80.2% 79.8%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 51.0 4.72e-01 97.9% 73.0%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 48.0 4.55e-01 92.7% 81.4%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 40.0 4.29e-01 81.2% 87.7%
4gj4D00 3.30.450.260 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem NO binding associated domain 0.56 40.0 3.80e-01 99.0% 61.5%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 39.0 4.12e-01 78.1% 84.1%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.55 44.0 3.64e-01 89.6% 50.5%
2zzeA04 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.54 41.0 4.18e-01 92.7% 84.2%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.53 43.0 4.17e-01 87.5% 99.1%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 40.0 3.84e-01 81.2% 76.1%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 45.0 4.46e-01 96.9% 93.3%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.52 44.0 4.03e-01 91.7% 92.0%
3i9fB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 3.07e-01 74.0% 85.2%
1zboA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.52 42.0 4.00e-01 88.5% 99.1%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.51 44.0 3.89e-01 95.8% 89.6%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 42.0 4.42e-01 93.8% 100.0%
2mklC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 34.0 3.39e-01 75.0% 64.8%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 70.0 6.66e-01 91.7% 98.2%
5059785 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 51.0 5.54e-01 83.3% 82.5%
3058418 1.1.13.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.74 61.0 5.97e-01 91.7% 82.4%
3970015 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 53.0 5.35e-01 96.9% 81.9%
185291 1.1.13.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.68 53.0 5.76e-01 90.6% 100.0%
4092486 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.67 45.0 3.62e-01 90.6% 36.7%
4983682 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.65 57.0 4.97e-01 93.8% 83.6%
4933308 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.65 57.0 4.77e-01 93.8% 72.9%
5075917 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.64 55.0 4.74e-01 94.8% 79.3%
3946118 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.62 45.0 5.09e-01 76.0% 100.0%
1096951 1.1.5.13 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.62 53.0 3.92e-01 95.8% 42.2%
3267872 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 48.0 4.33e-01 83.3% 61.5%
4995815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 54.0 4.92e-01 95.8% 77.6%
3965594 1.1.13.53 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 0.61 48.0 4.86e-01 88.5% 84.2%
3788348 1.1.7.81 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.60 51.0 4.78e-01 90.6% 98.3%
3501754 1.1.13.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N 0.60 53.0 5.15e-01 95.8% 98.1%
3249410 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 37.0 4.17e-01 77.1% 85.5%
3256764 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 49.0 4.43e-01 89.6% 99.2%
5037173 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 49.0 4.95e-01 87.5% 93.7%
3187444 1.1.7.81 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.59 49.0 4.62e-01 89.6% 97.4%
3972102 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 48.0 4.82e-01 94.8% 88.0%
3304251 221.1.2.5 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 0.57 36.0 3.79e-01 92.7% 69.7%
3483841 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.57 49.0 4.86e-01 96.9% 87.4%
3389361 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 47.0 4.75e-01 89.6% 96.8%
3980899 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 48.0 4.65e-01 93.8% 91.8%
4257535 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.56 46.0 4.40e-01 93.8% 75.7%
4155840 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.56 40.0 3.87e-01 75.0% 76.9%
3861159 1.1.8.8 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III 0.56 43.0 3.73e-01 85.4% 83.1%
3688711 1.1.7.81 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.56 48.0 4.62e-01 94.8% 99.1%
4959737 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 45.0 4.74e-01 100.0% 97.6%
4313132 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.55 44.0 3.30e-01 88.5% 45.5%
3678892 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.54 36.0 3.89e-01 76.0% 81.2%
4475003 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.54 45.0 3.26e-01 88.5% 47.7%
3491140 221.1.2.16 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C 0.53 36.0 3.54e-01 93.8% 63.8%
4245054 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.53 43.0 3.26e-01 89.6% 45.0%
3741512 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.53 40.0 3.90e-01 81.2% 82.9%
4996474 873.1.1.22 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF25939 0.53 43.0 3.46e-01 89.6% 80.5%
188 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 43.0 4.13e-01 89.6% 99.1%
4610038 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 44.0 3.30e-01 91.7% 46.4%
3956124 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 42.0 3.30e-01 88.5% 51.4%
4458331 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 43.0 3.30e-01 93.8% 46.0%
4637249 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.51 43.0 3.32e-01 92.7% 51.4%
4531216 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.51 39.0 2.88e-01 80.2% 78.3%
3714246 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 46.0 3.06e-01 100.0% 57.0%
4586418 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 35.0 3.25e-01 71.9% 73.1%
4171744 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.51 43.0 3.29e-01 95.8% 46.0%
4169706 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.50 43.0 3.26e-01 94.8% 45.6%