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JN627160.1__AEV89515.1__OBP_078__00078

Bact-Vir

JN627160.1__AEV89515.1__OBP_078__00078

Identity

Accession:
JN627160 ↗
Kingdom:
phage

Quality

94.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Petsuvirus› Pseudomonas_phage_OBP

TaxID: 1124849

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-105
PDB
Domain cluster: rep: OQ632216.1__WGL32520.1__Arash_gp69c__00069__D1-99
D2 medium residues 106-164
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ow2A00 1.10.10.930 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 53.0 5.05e-01 100.0% 78.1%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.62 50.0 4.32e-01 93.2% 65.7%
5b1aH00 1.10.10.140 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cytochrome c oxidase, subunit VIb 0.62 49.0 4.54e-01 91.5% 79.7%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 45.0 4.30e-01 79.7% 69.1%
3p01A01 6.10.140.590 Special › Helix non-globular › Helix Hairpins › 0.59 47.0 4.29e-01 91.5% 71.1%
2h09A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.58 37.0 3.82e-01 81.4% 69.6%
3nrgA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 44.0 3.13e-01 89.8% 54.4%
3acxA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 47.0 3.11e-01 100.0% 49.3%
4hhxA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.56 38.0 3.26e-01 96.6% 41.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 4.05e-01 84.7% 95.8%
1x4qA01 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.53 37.0 3.59e-01 89.8% 63.4%
4rweA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 38.0 3.10e-01 98.3% 38.3%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.46e-01 100.0% 78.3%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.51 41.0 4.08e-01 96.6% 95.4%
6humG01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.51 37.0 2.82e-01 81.4% 34.4%
2cw7A02 1.10.10.1010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV 0.50 38.0 2.95e-01 86.4% 37.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3416035 104.1.1.0 ↗ alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain 0.65 51.0 5.30e-01 93.2% 94.5%
3601614 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.63 44.0 3.90e-01 74.6% 56.7%
3934732 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 45.0 4.40e-01 84.7% 81.5%
3592885 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 46.0 4.62e-01 93.2% 100.0%
4140739 1057.1.1.1 ↗ a+b two layers › Endonuclease PI-TkoII domain IV › Endonuclease PI-TkoII domain IV › Endonuclease PI-TkoII domain IV › PI-TkoII_IV 0.54 38.0 2.89e-01 76.3% 42.0%