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JN627160.1__AEV89525.1__OBP_088__00088
Bact-VirJN627160.1__AEV89525.1__OBP_088__00088
Identity
- Accession:
- JN627160 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Taxonomy
TaxID: 1124849
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-149
Domain cluster:
rep: OP056089.1__UYD72102.1__X__00002__D5-102
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.85 | 55.0 | 6.28e-01 | 77.7% | 85.8% |
| 3tndB01 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.55 | 19.0 | 3.08e-01 | 87.8% | 95.1% |
| 4j80A02 | 2.60.260.20 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain | 0.54 | 24.0 | 3.26e-01 | 82.0% | 81.8% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.50 | 36.0 | 3.46e-01 | 74.1% | 69.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.77 | 55.0 | 6.02e-01 | 75.5% | 87.8% |
| 4956695 | 4.15.1.0 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like | 0.58 | 29.0 | 3.68e-01 | 77.0% | 81.2% |
| 3593972 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.54 | 23.0 | 3.22e-01 | 77.7% | 86.7% |
| 4029080 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.53 | 44.0 | 4.68e-01 | 99.3% | 99.2% |
| 4964178 | 319.1.1.29 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF7127 | 0.52 | 23.0 | 2.94e-01 | 84.9% | 69.9% |
| 3244040 | 223.1.1.108 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VGCC_alpha2, PF30670 | 0.51 | 37.0 | 2.63e-01 | 76.3% | 65.7% |
| 89916 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.51 | 36.0 | 3.46e-01 | 73.4% | 68.5% |
| 8233 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.50 | 36.0 | 3.46e-01 | 74.1% | 69.1% |