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JN627160.1__AEV89675.1__OBP_238__00238
Bact-VirJN627160.1__AEV89675.1__OBP_238__00238
Identity
- Accession:
- JN627160 ↗
- Kingdom:
- phage
Quality
82.6
mean pLDDT
Taxonomy
TaxID: 1124849
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3swxA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.74 | 53.0 | 5.19e-01 | 74.5% | 70.7% |
| 7c5wA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 59.0 | 4.26e-01 | 87.3% | 89.9% |
| 2f93B00 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 58.0 | 6.05e-01 | 90.9% | 96.1% |
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.72 | 49.0 | 5.27e-01 | 72.7% | 84.8% |
| 3fxdC00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.64 | 46.0 | 4.77e-01 | 74.5% | 90.0% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 51.0 | 4.97e-01 | 90.9% | 85.5% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.63 | 52.0 | 3.40e-01 | 90.9% | 23.4% |
| 2iexA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.62 | 45.0 | 4.63e-01 | 80.0% | 84.3% |
| 1b3uA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 42.0 | 2.44e-01 | 80.0% | 7.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3468429 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.84 | 70.0 | 4.12e-01 | 89.1% | 68.2% |
| 3643699 | 5086.1.1.207 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Choline_transpo | 0.78 | 70.0 | 4.67e-01 | 100.0% | 27.3% |
| 1626921 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.75 | 54.0 | 5.35e-01 | 80.0% | 72.4% |
| 3168580 | 603.1.1.137 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › BSD | 0.68 | 56.0 | 4.03e-01 | 90.9% | 40.6% |
| 3977737 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.67 | 54.0 | 4.42e-01 | 96.4% | 46.1% |
| 3272845 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.64 | 54.0 | 3.26e-01 | 94.5% | 14.5% |
| 59983 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 42.0 | 2.43e-01 | 80.0% | 7.0% |
| 4567932 | 109.4.1.170 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N | 0.56 | 47.0 | 2.62e-01 | 96.4% | 57.7% |