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JN627160.1__AEV89737.1__OBP_300__00300

Bact-Vir

JN627160.1__AEV89737.1__OBP_300__00300

Identity

Accession:
JN627160 ↗
Kingdom:
phage

Quality

76.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Petsuvirus› Pseudomonas_phage_OBP

TaxID: 1124849

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-105
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2haxA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 28.0 4.05e-01 80.4% 81.4%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 37.0 4.08e-01 95.1% 68.8%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 29.0 3.42e-01 87.3% 59.2%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 26.0 3.48e-01 80.4% 69.8%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 36.0 4.05e-01 95.1% 73.7%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 31.0 3.36e-01 84.3% 53.5%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.61 53.0 5.05e-01 96.1% 93.3%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 25.0 3.57e-01 77.5% 92.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.59 28.0 3.34e-01 92.2% 63.6%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 30.0 3.56e-01 90.2% 72.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.56 24.0 3.19e-01 80.4% 75.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 29.0 3.35e-01 87.3% 70.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 27.0 3.30e-01 89.2% 73.3%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 27.0 3.22e-01 91.2% 67.2%
3t0qA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.52 47.0 3.36e-01 100.0% 78.3%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.52 26.0 2.98e-01 86.3% 64.4%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 28.0 3.21e-01 95.1% 75.0%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 37.0 3.22e-01 77.5% 96.2%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 37.0 3.18e-01 77.5% 59.5%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4152624 375.1.1.17 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1f 0.68 29.0 4.21e-01 81.4% 97.5%
5001537 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.64 50.0 3.20e-01 84.3% 72.8%
5065570 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 35.0 3.83e-01 95.1% 63.5%
5014724 295.1.1.51 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.61 50.0 5.08e-01 90.2% 91.0%
3523918 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.59 27.0 3.27e-01 82.4% 63.1%
4940177 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 27.0 3.17e-01 82.4% 58.6%
4968259 3926.1.1.0 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D 0.58 39.0 3.48e-01 84.3% 47.6%
5039314 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 43.0 3.75e-01 88.2% 51.6%
3880325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 28.0 3.23e-01 87.3% 62.9%
3490023 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 33.0 3.69e-01 94.1% 73.8%
3741878 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 29.0 3.43e-01 84.3% 75.4%
5077594 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.55 28.0 3.59e-01 95.1% 89.1%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 26.0 3.09e-01 87.3% 62.9%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 27.0 3.13e-01 84.3% 64.0%
3286565 2003.1.11.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › AdoHcyase 0.53 41.0 2.67e-01 82.4% 36.1%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 25.0 3.01e-01 83.3% 68.3%
2768841 2003.1.2.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.52 34.0 2.85e-01 70.6% 41.2%
3598286 2488.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot 0.52 37.0 2.96e-01 88.2% 37.5%
4030393 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 45.0 2.74e-01 99.0% 21.6%
5047621 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 36.0 2.97e-01 72.5% 96.8%
4053930 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 47.0 4.09e-01 100.0% 68.7%
1543869 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 33.0 2.80e-01 70.6% 40.7%
2526759 2003.1.2.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 33.0 2.81e-01 70.6% 41.7%
3782325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.50 25.0 2.99e-01 80.4% 71.4%