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JN638751.1__AEO93305.1__G_34__00034

Bact-Vir

JN638751.1__AEO93305.1__G_34__00034

Identity

Accession:
JN638751 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Donellivirus› Bacillus_phage_G

TaxID: 2884420

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-115
PDB
Domain cluster: rep: JN638751.1__AEO93465.1__G_206__00198__D105-202
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.72 35.0 4.62e-01 74.3% 85.0%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.69 36.0 4.83e-01 78.9% 94.9%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.66 35.0 3.64e-01 77.1% 55.4%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.66 50.0 4.80e-01 78.9% 91.0%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.65 45.0 3.86e-01 71.6% 57.5%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 39.0 4.65e-01 82.6% 100.0%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 42.0 3.78e-01 75.2% 89.8%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 45.0 3.31e-01 88.1% 90.7%
1b78A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.55 44.0 3.77e-01 88.1% 96.2%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 39.0 3.89e-01 74.3% 100.0%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 43.0 4.27e-01 82.6% 84.2%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.54 49.0 3.59e-01 100.0% 70.6%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 47.0 4.42e-01 100.0% 87.9%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 39.0 3.66e-01 76.1% 77.7%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 40.0 3.63e-01 78.0% 88.1%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 43.0 3.23e-01 87.2% 69.6%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 47.0 4.50e-01 99.1% 99.2%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 43.0 3.11e-01 89.9% 86.1%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 42.0 3.14e-01 87.2% 92.6%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 46.0 4.36e-01 99.1% 96.1%
1m6kA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 36.0 2.76e-01 73.4% 88.8%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.50 37.0 3.30e-01 76.1% 82.1%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707067 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 52.0 4.12e-01 85.3% 67.1%
5014277 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.63 40.0 4.42e-01 100.0% 81.2%
4978638 7504.1.1.2 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.62 50.0 4.29e-01 85.3% 94.7%
3195743 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 45.0 3.47e-01 100.0% 36.9%
3282130 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.61 45.0 4.14e-01 77.1% 79.1%
3625247 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.60 52.0 5.18e-01 96.3% 94.5%
3690464 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 43.0 3.51e-01 99.1% 42.1%
4598563 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.59 41.0 2.66e-01 70.6% 47.7%
3167073 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 49.0 4.35e-01 90.8% 93.8%
4263663 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 48.0 4.32e-01 90.8% 81.9%
3096198 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.59 44.0 4.44e-01 78.0% 90.7%
3404339 9.2.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.59 42.0 3.91e-01 74.3% 79.3%
2466103 265.1.1.2 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Phage_coat 0.58 45.0 4.25e-01 81.7% 89.3%
4031368 3264.1.1.0 ↗ 0.58 43.0 3.96e-01 89.0% 59.3%
4976136 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 41.0 4.32e-01 91.7% 84.2%
3466796 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.57 42.0 3.64e-01 78.9% 78.3%
3920557 4210.1.1.3 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 0.56 39.0 4.12e-01 90.8% 81.1%
3243080 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.56 44.0 4.54e-01 87.2% 90.0%
3827726 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 44.0 3.22e-01 83.5% 87.2%
5042975 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.55 39.0 3.23e-01 72.5% 66.2%
3588663 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.55 37.0 3.97e-01 80.7% 78.9%
4511768 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.55 43.0 3.11e-01 83.5% 92.0%
3425526 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.55 41.0 3.50e-01 79.8% 61.2%
3711119 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.55 39.0 3.87e-01 73.4% 82.6%
3603731 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 39.0 3.55e-01 72.5% 80.7%
4152335 9.2.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.54 42.0 4.06e-01 81.7% 96.8%
5037123 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.54 39.0 3.68e-01 74.3% 90.8%
4947114 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.54 42.0 3.68e-01 83.5% 57.0%
5055280 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 42.0 3.85e-01 83.5% 71.7%
3978756 3197.1.1.1 ↗ a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.54 39.0 3.82e-01 75.2% 69.2%
3513352 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.54 47.0 4.63e-01 100.0% 92.2%
3792470 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.54 47.0 4.57e-01 99.1% 89.6%
3506414 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.53 48.0 3.81e-01 100.0% 71.1%
2022 12.3.1.16 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glucodextran_N 0.53 43.0 3.22e-01 87.2% 68.6%
4426077 241.1.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.53 43.0 3.94e-01 91.7% 97.4%
3694146 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.46e-01 86.2% 91.9%
3496143 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.51 37.0 3.35e-01 74.3% 82.1%
3276143 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.51 36.0 3.06e-01 72.5% 69.4%