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JN638751.1__AEO93311.1__G_40__00040

Bact-Vir

JN638751.1__AEO93311.1__G_40__00040

Identity

Accession:
JN638751 ↗
Kingdom:
phage

Quality

72.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Donellivirus› Bacillus_phage_G

TaxID: 2884420

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-83
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 59.0 6.00e-01 100.0% 77.4%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 56.0 5.91e-01 100.0% 84.2%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 5.60e-01 100.0% 78.3%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 53.0 5.47e-01 100.0% 78.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 54.0 5.46e-01 100.0% 76.2%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 5.58e-01 100.0% 94.3%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 5.02e-01 100.0% 73.8%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.70 52.0 5.16e-01 100.0% 76.1%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 56.0 5.34e-01 100.0% 74.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.62e-01 100.0% 85.1%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.68 46.0 4.00e-01 70.3% 99.0%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.62 54.0 4.35e-01 98.4% 70.9%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.00e-01 82.8% 50.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.79e-01 93.8% 83.3%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 4.37e-01 93.8% 86.7%
1olrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.57 45.0 3.18e-01 89.1% 32.7%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.57 43.0 3.78e-01 82.8% 57.0%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.93e-01 95.3% 81.2%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.56 49.0 4.44e-01 100.0% 77.8%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.44e-01 92.2% 87.7%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 39.0 3.02e-01 78.1% 74.0%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.54 36.0 2.26e-01 71.9% 67.3%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 44.0 3.87e-01 93.8% 60.8%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 43.0 4.16e-01 96.9% 77.3%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 3.40e-01 92.2% 76.2%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.96e-01 96.9% 24.6%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 43.0 3.80e-01 89.1% 61.5%
3oa4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 35.0 2.84e-01 90.6% 33.8%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 40.0 3.92e-01 87.5% 76.1%
1vybA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.52 38.0 2.59e-01 78.1% 44.9%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.52 43.0 3.79e-01 98.4% 62.5%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 45.0 3.01e-01 100.0% 51.7%
3sd2A01 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 37.0 3.55e-01 95.3% 67.5%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 37.0 3.08e-01 82.8% 65.4%
4ozuA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 40.0 2.58e-01 92.2% 22.8%
4zk3A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 41.0 3.31e-01 92.2% 73.2%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4461457 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 62.0 6.23e-01 100.0% 73.4%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.84 58.0 6.24e-01 100.0% 83.6%
4932609 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 58.0 5.85e-01 100.0% 73.8%
3440094 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.82 58.0 6.03e-01 100.0% 80.0%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.81 58.0 6.00e-01 100.0% 80.0%
3296864 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.81 53.0 5.46e-01 100.0% 71.7%
3416068 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.80 60.0 4.46e-01 100.0% 32.9%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.80 55.0 5.90e-01 100.0% 85.2%
3941391 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 52.0 5.43e-01 96.9% 73.3%
3847592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 55.0 3.28e-01 100.0% 10.9%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 56.0 5.42e-01 100.0% 70.3%
4141828 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 56.0 5.38e-01 100.0% 70.3%
3512419 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 60.0 5.48e-01 100.0% 67.1%
3879653 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.73 56.0 5.51e-01 100.0% 75.7%
5029166 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 6.23e-01 100.0% 86.5%
3898370 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 58.0 6.00e-01 100.0% 96.6%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 63.0 5.99e-01 100.0% 85.3%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.07e-01 100.0% 62.1%
4084890 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.86e-01 98.4% 98.5%
4995609 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 51.0 3.97e-01 84.4% 55.2%
3252839 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.22e-01 100.0% 78.7%
4185547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.12e-01 100.0% 77.6%
3996907 2.1.1.27 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rpb8 0.63 52.0 4.25e-01 95.3% 86.8%
3507010 3794.1.2.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.62 46.0 3.86e-01 78.1% 89.5%
3188712 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.62 56.0 4.78e-01 100.0% 71.0%
3167531 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 51.0 4.03e-01 100.0% 45.2%
3821287 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 51.0 3.97e-01 100.0% 43.6%
2088968 3385.1.1.1 ↗ beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › AltA1 0.60 42.0 3.51e-01 76.6% 90.2%
3063909 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.60 46.0 2.85e-01 85.9% 74.0%
3348812 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 40.0 3.15e-01 100.0% 31.0%
4024274 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.59 50.0 4.30e-01 100.0% 58.1%
4400596 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.59 51.0 3.81e-01 100.0% 38.7%
3176702 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.59 52.0 3.93e-01 100.0% 46.5%
5054047 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 47.0 4.45e-01 96.9% 74.7%
2552660 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.58 49.0 4.03e-01 100.0% 56.7%
3936609 5.1.3.176 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.58 49.0 2.99e-01 95.3% 22.6%
3953959 4.1.1.424 ↗ beta barrels › SH3 › SH3 › SH3 › PF29823 0.58 42.0 4.52e-01 98.4% 100.0%
4668960 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.11e-01 100.0% 56.4%
3623534 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.36e-01 95.3% 88.9%
4533094 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 46.0 3.75e-01 93.8% 75.4%
3521669 220.1.1.155 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 0.55 48.0 4.07e-01 98.4% 61.0%
3599435 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.53 46.0 2.85e-01 98.4% 16.7%
3377650 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 45.0 3.03e-01 95.3% 30.3%
3596570 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.85e-01 93.8% 23.6%
4002675 5.1.3.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.53 45.0 2.95e-01 95.3% 27.4%
3360888 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.53 45.0 2.66e-01 95.3% 16.0%
4944535 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 37.0 2.54e-01 79.7% 84.1%
3380327 5.1.10.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › WD40_RFWD3 0.52 42.0 3.74e-01 93.8% 77.0%
3861601 3369.1.1.1 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal 0.52 43.0 3.31e-01 96.9% 92.6%
4955635 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.52 35.0 3.51e-01 89.1% 70.3%
3902169 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 39.0 3.35e-01 92.2% 82.4%