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JN638751.1__AEO93332.1__G_61__00061
Bact-VirJN638751.1__AEO93332.1__G_61__00061
Identity
- Accession:
- JN638751 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-44
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11121.14 best | DUF2639 | 52.8 | 4.60e-14 | 89.5% | 84.2% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qbyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 65.0 | 4.21e-01 | 100.0% | 19.7% |
| 4hluD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 58.0 | 3.56e-01 | 94.7% | 27.3% |
| 2awnC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 57.0 | 3.58e-01 | 94.7% | 31.7% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 57.0 | 4.60e-01 | 100.0% | 80.7% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 56.0 | 3.39e-01 | 94.7% | 28.6% |
| 1tdzA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 54.0 | 3.78e-01 | 94.7% | 47.8% |
| 4pl0A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 51.0 | 3.09e-01 | 89.5% | 57.0% |
| 3ff5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 41.0 | 3.64e-01 | 84.2% | 46.3% |
| 3tqsA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.60 | 48.0 | 4.14e-01 | 94.7% | 84.6% |
| 2azjA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 47.0 | 2.91e-01 | 100.0% | 49.6% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 45.0 | 3.17e-01 | 86.8% | 67.3% |
| 3fseA01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.54 | 44.0 | 2.95e-01 | 100.0% | 78.2% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.54 | 40.0 | 3.65e-01 | 100.0% | 83.6% |
| 3futA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.53 | 42.0 | 3.57e-01 | 89.5% | 67.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943133 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.86 | 67.0 | 6.40e-01 | 100.0% | 73.3% |
| 3716420 | 130.1.1.6 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › PRP4 | 0.79 | 62.0 | 5.56e-01 | 100.0% | 61.8% |
| 3589827 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.73 | 60.0 | 3.72e-01 | 94.7% | 31.4% |
| 3272274 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.73 | 61.0 | 3.92e-01 | 100.0% | 20.0% |
| 4681565 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.71 | 60.0 | 3.49e-01 | 94.7% | 21.0% |
| 4027969 | 102.9.1.0 ↗ | alpha arrays › HhH/H2TH › Cdc45 CID domain › Cdc45 CID domain | 0.69 | 56.0 | 4.25e-01 | 94.7% | 75.8% |
| 4237173 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.69 | 57.0 | 3.48e-01 | 94.7% | 28.2% |
| 4664954 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 54.0 | 3.35e-01 | 94.7% | 29.4% |
| 3597463 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.60 | 47.0 | 3.69e-01 | 86.8% | 45.0% |
| 3744633 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 48.0 | 3.50e-01 | 94.7% | 87.8% |
| 3405596 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 46.0 | 3.37e-01 | 100.0% | 36.5% |
| 3961212 | 101.1.9.104 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ad_Cy_reg | 0.56 | 44.0 | 3.43e-01 | 89.5% | 62.4% |
| 3939304 | 4095.1.1.3 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M | 0.55 | 47.0 | 2.67e-01 | 100.0% | 13.3% |
| 5024243 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.52 | 42.0 | 3.39e-01 | 89.5% | 93.3% |
| 4547477 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.52 | 38.0 | 2.81e-01 | 81.6% | 70.0% |