←Back to structures
JN638751.1__AEO93339.1__G_68__00068
Bact-VirJN638751.1__AEO93339.1__G_68__00068
Identity
- Accession:
- JN638751 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-82
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 52.0 | 4.47e-01 | 70.7% | 47.8% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.74 | 48.0 | 4.14e-01 | 70.7% | 43.1% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 54.0 | 4.65e-01 | 84.0% | 86.5% |
| 5ekdA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.67 | 47.0 | 4.15e-01 | 77.3% | 49.5% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 51.0 | 4.76e-01 | 86.7% | 98.9% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 45.0 | 4.56e-01 | 74.7% | 93.4% |
| 2pk0A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.60 | 42.0 | 2.92e-01 | 72.0% | 30.4% |
| 5f1mA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.60 | 43.0 | 2.96e-01 | 76.0% | 37.0% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.57 | 41.0 | 4.04e-01 | 76.0% | 71.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4061410 | 3748.1.1.2 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › CSN5_C | 0.83 | 68.0 | 5.98e-01 | 86.7% | 65.7% |
| 5017842 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.75 | 51.0 | 4.93e-01 | 73.3% | 62.4% |
| 3533723 | 3914.1.1.4 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMC | 0.71 | 66.0 | 3.89e-01 | 100.0% | 77.0% |
| 3689259 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.70 | 53.0 | 3.48e-01 | 81.3% | 43.8% |
| 3468013 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.69 | 46.0 | 4.15e-01 | 72.0% | 51.0% |
| 4141759 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.64 | 51.0 | 3.63e-01 | 88.0% | 37.0% |
| 3287085 | 192.29.1.55 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF5313 | 0.61 | 42.0 | 3.90e-01 | 70.7% | 63.2% |
| 3585779 | 3345.1.1.1 ↗ | alpha arrays › MRG domain › MRG domain › MRG domain › MRG | 0.60 | 44.0 | 3.18e-01 | 77.3% | 32.1% |
| 3298752 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.59 | 49.0 | 4.22e-01 | 89.3% | 71.3% |
| 3660913 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.55 | 37.0 | 3.51e-01 | 70.7% | 71.1% |
| 3347726 | 150.1.1.104 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Piezo_THU9_anchor | 0.54 | 41.0 | 3.41e-01 | 81.3% | 86.9% |