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JN638751.1__AEO93339.1__G_68__00068

Bact-Vir

JN638751.1__AEO93339.1__G_68__00068

Identity

Accession:
JN638751 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-82
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 52.0 4.47e-01 70.7% 47.8%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.74 48.0 4.14e-01 70.7% 43.1%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.67 54.0 4.65e-01 84.0% 86.5%
5ekdA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.67 47.0 4.15e-01 77.3% 49.5%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.64 51.0 4.76e-01 86.7% 98.9%
2fnaA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 45.0 4.56e-01 74.7% 93.4%
2pk0A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 42.0 2.92e-01 72.0% 30.4%
5f1mA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 43.0 2.96e-01 76.0% 37.0%
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.57 41.0 4.04e-01 76.0% 71.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4061410 3748.1.1.2 extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › CSN5_C 0.83 68.0 5.98e-01 86.7% 65.7%
5017842 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.75 51.0 4.93e-01 73.3% 62.4%
3533723 3914.1.1.4 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMC 0.71 66.0 3.89e-01 100.0% 77.0%
3689259 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.70 53.0 3.48e-01 81.3% 43.8%
3468013 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.69 46.0 4.15e-01 72.0% 51.0%
4141759 5045.1.1.1 alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.64 51.0 3.63e-01 88.0% 37.0%
3287085 192.29.1.55 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF5313 0.61 42.0 3.90e-01 70.7% 63.2%
3585779 3345.1.1.1 alpha arrays › MRG domain › MRG domain › MRG domain › MRG 0.60 44.0 3.18e-01 77.3% 32.1%
3298752 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.59 49.0 4.22e-01 89.3% 71.3%
3660913 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.55 37.0 3.51e-01 70.7% 71.1%
3347726 150.1.1.104 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Piezo_THU9_anchor 0.54 41.0 3.41e-01 81.3% 86.9%