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JN638751.1__AEO93457.1__G_197__00189

Bact-Vir

JN638751.1__AEO93457.1__G_197__00189

Identity

Accession:
JN638751 ↗
Kingdom:
phage

Quality

97.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-82
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00381.25 best PTS-HPr 51.7 1.00e-13 100.0% 93.8%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jelP00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.94 90.0 8.89e-01 100.0% 95.3%
1fu0A00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.92 86.0 8.43e-01 100.0% 98.9%
5t17A00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.82 77.0 7.56e-01 100.0% 96.5%
2dgrA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.70 52.0 5.63e-01 100.0% 94.0%
2aefA03 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.66 52.0 5.33e-01 100.0% 89.9%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.66 52.0 5.11e-01 100.0% 77.5%
2bkoA02 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.66 54.0 5.46e-01 100.0% 90.1%
4e9jA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.64 48.0 5.18e-01 100.0% 92.8%
3u1kB04 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.63 45.0 4.76e-01 100.0% 87.5%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.61 53.0 5.38e-01 100.0% 95.0%
2qndA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.61 50.0 5.06e-01 100.0% 91.3%
2p8tA02 3.30.1360.30 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › GAD-like domain 0.61 55.0 4.99e-01 100.0% 82.6%
2kinA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.60 52.0 3.74e-01 97.5% 64.3%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.60 46.0 4.98e-01 100.0% 98.6%
1zd0A01 3.30.2380.10 Alpha Beta › 2-Layer Sandwich › PF0523-like › CGI121/TPRKB 0.58 50.0 4.36e-01 100.0% 82.3%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.57 37.0 4.22e-01 100.0% 91.5%
4ewtA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 49.0 4.47e-01 100.0% 91.3%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 43.0 4.13e-01 82.7% 74.0%
1rkqA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 46.0 4.29e-01 92.6% 99.1%
1rlhA02 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.56 50.0 4.68e-01 100.0% 87.1%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.56 45.0 3.85e-01 90.1% 89.9%
2l7rA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 41.0 4.28e-01 80.2% 90.5%
5u78C00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.74e-01 82.7% 95.7%
1l0wA03 3.30.1360.30 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › GAD-like domain 0.55 47.0 4.03e-01 100.0% 67.4%
3wnzA04 3.90.1170.60 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › 0.54 49.0 4.62e-01 100.0% 92.7%
2pq0A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.54 44.0 4.19e-01 93.8% 99.0%
3tiiA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.54 39.0 4.16e-01 77.8% 100.0%
1uc8A02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.54 36.0 4.08e-01 81.5% 100.0%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 45.0 3.37e-01 100.0% 84.0%
1mwqA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.53 46.0 4.36e-01 100.0% 84.0%
3girA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.53 47.0 4.62e-01 100.0% 95.3%
1fnoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 4.16e-01 100.0% 91.8%
3pvlA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 39.0 3.73e-01 81.5% 89.6%
3demA03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.52 47.0 4.19e-01 100.0% 73.7%
7ykvB02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.52 36.0 3.43e-01 100.0% 58.4%
5ghrA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.52 36.0 3.21e-01 100.0% 48.0%
8d8lF01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.52 44.0 3.94e-01 100.0% 72.4%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.52 43.0 3.69e-01 95.1% 93.3%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 38.0 3.67e-01 82.7% 99.0%
3qpiA00 3.30.70.3420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 44.0 3.55e-01 100.0% 52.6%
8gk4C02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.51 43.0 4.17e-01 98.8% 96.8%
3cf6E02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 39.0 3.56e-01 98.8% 60.3%
2uwqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 37.0 3.71e-01 81.5% 84.9%
6v55A01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.50 44.0 4.02e-01 100.0% 72.3%
4pytA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.50 39.0 3.46e-01 87.7% 82.0%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2879452 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.98 95.0 9.41e-01 100.0% 96.4%
4103307 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.96 92.0 9.06e-01 100.0% 95.3%
4990 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.96 91.0 9.00e-01 100.0% 95.2%
5064118 322.1.1.0 a+b two layers › HPr-like › HPr-like › HPr-like 0.96 91.0 8.86e-01 100.0% 92.0%
3972149 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.96 89.0 9.01e-01 97.5% 98.8%
4963717 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.95 90.0 8.69e-01 100.0% 92.2%
3948410 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.95 90.0 8.65e-01 100.0% 91.1%
3972112 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.94 90.0 8.85e-01 100.0% 96.5%
3164579 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.94 90.0 8.06e-01 100.0% 80.0%
3978801 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.94 89.0 8.81e-01 100.0% 95.3%
4568147 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.93 88.0 8.47e-01 100.0% 91.0%
3588312 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.92 86.0 8.40e-01 100.0% 97.7%
3945048 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.92 86.0 8.50e-01 100.0% 95.3%
4991 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.91 85.0 8.28e-01 100.0% 97.7%
5056082 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.89 84.0 7.45e-01 100.0% 83.6%
4008836 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.89 83.0 8.17e-01 100.0% 97.6%
3979258 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.89 82.0 7.94e-01 100.0% 92.2%
4009784 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.88 82.0 7.92e-01 100.0% 92.2%
4447647 322.1.1.5 a+b two layers › HPr-like › HPr-like › HPr-like › PF29819 0.74 66.0 6.08e-01 98.8% 82.7%
4972104 304.123.1.1 a+b two layers › Alpha-beta plaits › PF0523-like › PF0523-like › CGI-121 0.70 63.0 4.74e-01 100.0% 61.0%
3824515 327.11.2.11 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 0.67 60.0 5.65e-01 100.0% 91.0%
3645896 327.11.2.11 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 0.67 59.0 5.57e-01 100.0% 92.0%
4945261 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.65 46.0 3.92e-01 100.0% 46.2%
4947297 329.1.1.0 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain 0.63 57.0 5.03e-01 100.0% 82.6%
3251038 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.62 47.0 4.50e-01 81.5% 73.7%
4941003 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.62 56.0 5.04e-01 100.0% 84.5%
3271101 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.62 46.0 4.71e-01 100.0% 81.2%
5077294 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.60 55.0 5.09e-01 100.0% 92.0%
5060151 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.60 53.0 4.98e-01 100.0% 95.0%
3927045 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.60 47.0 4.17e-01 86.4% 64.2%
4994885 4261.1.1.1 a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C 0.59 49.0 4.41e-01 98.8% 65.2%
5049882 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.59 53.0 4.61e-01 100.0% 84.7%
4929138 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.59 53.0 4.78e-01 100.0% 86.4%
5065139 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.59 53.0 4.80e-01 100.0% 84.5%
4967778 329.1.1.2 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 0.59 53.0 4.79e-01 100.0% 84.5%
4524847 329.1.1.1 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD 0.58 52.0 4.47e-01 100.0% 68.5%
3490000 329.1.1.0 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain 0.58 52.0 4.70e-01 100.0% 74.5%
4018064 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.58 44.0 4.44e-01 82.7% 88.7%
3228368 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.58 52.0 4.77e-01 100.0% 78.1%
5050233 329.1.1.1 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD 0.57 52.0 4.41e-01 100.0% 71.5%
3694368 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.57 43.0 4.25e-01 81.5% 81.2%
4989562 304.3.1.4 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D 0.57 48.0 4.12e-01 100.0% 60.0%
3438711 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.57 45.0 4.38e-01 87.7% 90.0%
4413532 304.3.1.4 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D 0.57 48.0 4.06e-01 100.0% 68.0%
4957896 304.3.1.4 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D 0.56 44.0 4.28e-01 100.0% 78.9%
3974436 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.56 47.0 3.42e-01 100.0% 31.8%
4284428 329.1.1.1 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD 0.56 49.0 4.31e-01 100.0% 72.0%
2105092 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.56 47.0 4.23e-01 95.1% 80.0%
4981878 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 41.0 4.32e-01 77.8% 97.1%
3617471 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 48.0 3.73e-01 100.0% 47.9%
3945331 10.12.1.40 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 0.55 43.0 3.00e-01 85.2% 38.5%
1585470 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.55 45.0 4.24e-01 93.8% 81.2%
5002129 10.1.1.126 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF7308 0.54 46.0 3.65e-01 100.0% 95.3%
5070190 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.54 47.0 3.37e-01 100.0% 32.2%
3953665 304.28.1.13 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL 0.54 46.0 4.19e-01 100.0% 80.9%
4568030 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.53 46.0 3.31e-01 100.0% 34.7%
1789446 2484.1.1.61 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 0.52 37.0 2.93e-01 82.7% 34.5%
4928832 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.52 44.0 3.34e-01 100.0% 94.7%
3483645 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 38.0 3.87e-01 81.5% 92.5%
5065071 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.52 44.0 3.40e-01 100.0% 87.1%
3743959 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 41.0 3.49e-01 87.7% 82.0%
5032272 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.51 42.0 3.40e-01 100.0% 87.7%
4977475 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.51 43.0 3.31e-01 100.0% 88.6%
5065383 304.6.1.0 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.51 44.0 3.28e-01 100.0% 39.1%
3800665 3016.1.1.13 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SepSecS 0.51 44.0 3.56e-01 100.0% 68.5%
3291661 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.51 43.0 3.15e-01 100.0% 34.8%
4981301 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.51 44.0 4.23e-01 100.0% 88.4%
5040845 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.50 43.0 4.10e-01 100.0% 85.0%