←Back to structures

JN638751.1__AEO93512.1__G_253__00245

Bact-Vir

JN638751.1__AEO93512.1__G_253__00245

Identity

Accession:
JN638751 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Donellivirus› Bacillus_phage_G

TaxID: 2884420

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-116
PDB
Domain cluster: rep: KX620753.1__AOT24562.1__E6_33__00033__D133-219
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08797.17 best HIRAN 46.6 3.50e-12 97.0% 80.2%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k2yA00 3.30.70.2330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.90 83.0 8.20e-01 99.0% 93.2%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.67 42.0 3.96e-01 98.0% 52.1%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.66 40.0 4.39e-01 94.9% 74.7%
3nlcA01 3.30.70.2700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 37.0 4.19e-01 97.0% 75.0%
1p6vA00 2.40.280.10 Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B 0.64 57.0 5.33e-01 100.0% 82.4%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.63 37.0 3.79e-01 100.0% 59.4%
2yqzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 36.0 2.91e-01 100.0% 29.0%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 31.0 2.83e-01 100.0% 35.3%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.58 38.0 3.70e-01 97.0% 58.4%
4bhqA00 3.30.70.2830 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 31.0 3.01e-01 100.0% 45.0%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 39.0 3.79e-01 96.0% 65.1%
5fiiB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 31.0 3.38e-01 100.0% 65.4%
3tebB00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 36.0 2.73e-01 99.0% 25.0%
1o51A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 32.0 3.36e-01 100.0% 62.9%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 28.0 3.17e-01 98.0% 67.1%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 39.0 2.77e-01 79.8% 55.1%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 31.0 3.23e-01 100.0% 63.8%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 33.0 3.59e-01 90.9% 84.4%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3697243 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.90 79.0 7.08e-01 100.0% 70.0%
2069093 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.90 79.0 7.16e-01 100.0% 72.2%
2072038 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.89 79.0 7.89e-01 96.0% 92.1%
3330336 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.85 80.0 7.41e-01 100.0% 81.7%
3665217 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.85 78.0 6.81e-01 100.0% 68.6%
3310707 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.84 79.0 7.10e-01 100.0% 75.4%
3828376 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.83 71.0 6.38e-01 100.0% 68.5%
4660105 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.81 66.0 5.85e-01 100.0% 61.6%
4387556 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.81 70.0 7.01e-01 100.0% 90.9%
3303901 3468.1.1.0 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain 0.80 65.0 5.48e-01 100.0% 53.5%
3334834 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.80 73.0 7.19e-01 100.0% 92.3%
4588531 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.78 73.0 6.57e-01 100.0% 79.2%
3727266 3468.1.1.0 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain 0.76 70.0 6.37e-01 100.0% 77.7%
4954705 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.76 69.0 6.66e-01 99.0% 88.2%
3325200 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.75 71.0 6.47e-01 100.0% 86.4%
4952916 109.4.1.3613 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIRAN 0.73 65.0 4.52e-01 94.9% 32.9%
4680590 2.21.1.4 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SSO2105_N 0.67 60.0 4.81e-01 100.0% 94.4%
3795831 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 38.0 4.43e-01 100.0% 80.9%
3590201 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 38.0 3.77e-01 97.0% 51.9%
4557109 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.66 58.0 5.14e-01 99.0% 73.8%
4601389 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.65 59.0 5.16e-01 100.0% 71.6%
4597943 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.64 57.0 5.08e-01 100.0% 73.1%
4552630 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.64 57.0 5.34e-01 100.0% 85.6%
3972102 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.64 43.0 4.31e-01 100.0% 68.0%
4978302 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 38.0 3.35e-01 100.0% 39.3%
2831758 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.62 56.0 4.87e-01 100.0% 70.2%
4093835 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.62 55.0 5.20e-01 100.0% 85.0%
5065186 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 43.0 3.83e-01 100.0% 51.1%
3699932 2003.1.5.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT 0.61 39.0 2.84e-01 99.0% 25.1%
3995832 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.61 32.0 2.65e-01 100.0% 26.5%
5022358 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.61 35.0 3.41e-01 100.0% 48.7%
3471665 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.60 32.0 3.79e-01 100.0% 72.9%
5000388 304.44.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.60 33.0 3.42e-01 97.0% 55.6%
4947605 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 31.0 3.44e-01 99.0% 61.3%
4033714 1.1.13.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail 0.60 40.0 4.06e-01 100.0% 69.5%
3385565 320.1.1.16 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › HP0268 0.58 30.0 3.32e-01 97.0% 60.3%
5064953 873.1.1.13 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase 0.56 37.0 3.17e-01 100.0% 41.9%
3931635 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.55 31.0 3.43e-01 100.0% 69.3%
3928198 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 36.0 3.71e-01 100.0% 69.5%
4503821 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.55 32.0 3.66e-01 100.0% 80.0%
3620698 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.55 42.0 4.27e-01 86.9% 86.3%
5023975 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.54 34.0 3.18e-01 100.0% 48.8%
4001734 304.47.1.0 ↗ a+b two layers › Alpha-beta plaits › SEA domain › SEA domain 0.53 37.0 3.52e-01 97.0% 60.9%
3713805 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.52 35.0 2.50e-01 100.0% 22.6%