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JN638751.1__AEO93652.1__G_393__00385
Bact-VirJN638751.1__AEO93652.1__G_393__00385
Identity
- Accession:
- JN638751 ↗
- Kingdom:
- phage
Quality
90.3
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-60
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.67 | 46.0 | 4.77e-01 | 75.9% | 80.8% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.66 | 55.0 | 3.91e-01 | 100.0% | 30.3% |
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 42.0 | 4.76e-01 | 96.6% | 90.5% |
| 1h12A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.64 | 43.0 | 2.63e-01 | 70.7% | 22.5% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.63 | 43.0 | 4.63e-01 | 70.7% | 89.1% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 38.0 | 3.34e-01 | 87.9% | 40.7% |
| 5flwA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 44.0 | 2.84e-01 | 84.5% | 65.9% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.58 | 38.0 | 2.77e-01 | 70.7% | 25.5% |
| 5d1pA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 4.41e-01 | 91.4% | 82.1% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.56 | 40.0 | 3.26e-01 | 91.4% | 38.1% |
| 1bbyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 37.0 | 3.59e-01 | 70.7% | 76.8% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.55 | 47.0 | 3.31e-01 | 100.0% | 80.4% |
| 1jv2B04 | 4.10.1240.30 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.53 | 40.0 | 3.54e-01 | 93.1% | 54.7% |
| 3bwxA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 36.0 | 2.37e-01 | 75.9% | 31.9% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.42e-01 | 74.1% | 87.5% |
| 4wpzA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 40.0 | 2.51e-01 | 91.4% | 66.1% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.51 | 31.0 | 3.20e-01 | 70.7% | 60.0% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.51 | 40.0 | 3.36e-01 | 100.0% | 67.2% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 41.0 | 3.56e-01 | 91.4% | 95.7% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 35.0 | 2.82e-01 | 75.9% | 45.8% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 2.97e-01 | 77.6% | 61.4% |
| 3c5iD01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 37.0 | 3.44e-01 | 81.0% | 86.8% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3903213 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 47.0 | 3.35e-01 | 77.6% | 24.0% |
| 3404936 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.68 | 46.0 | 4.86e-01 | 70.7% | 82.0% |
| 3546607 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.68 | 46.0 | 4.87e-01 | 75.9% | 82.0% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.67 | 46.0 | 4.78e-01 | 75.9% | 76.4% |
| None | — | 0.63 | 46.0 | 2.55e-01 | 77.6% | 5.7% | |
| 1145920 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.63 | 46.0 | 4.07e-01 | 77.6% | 54.2% |
| 4009943 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.63 | 54.0 | 4.30e-01 | 100.0% | 66.4% |
| 4031151 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.58 | 42.0 | 3.94e-01 | 79.3% | 70.7% |
| 3172478 | 708.1.1.30 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF30069, PF30070 | 0.57 | 41.0 | 3.08e-01 | 79.3% | 35.8% |
| 3661489 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.57 | 47.0 | 4.16e-01 | 100.0% | 92.6% |
| 3483506 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.56 | 40.0 | 3.00e-01 | 77.6% | 43.9% |
| 3743247 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.56 | 38.0 | 2.40e-01 | 70.7% | 17.1% |
| 4960030 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 48.0 | 3.69e-01 | 100.0% | 69.6% |
| 3227256 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 39.0 | 2.76e-01 | 82.8% | 89.8% |
| 3582282 | 109.2.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Trehalase | 0.53 | 44.0 | 2.59e-01 | 100.0% | 36.9% |
| 4395961 | 212.1.1.14 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › CbiD | 0.52 | 43.0 | 3.24e-01 | 100.0% | 78.8% |
| 3623405 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.52 | 39.0 | 3.01e-01 | 86.2% | 55.3% |
| 2080140 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.52 | 40.0 | 2.59e-01 | 96.6% | 78.2% |
| 3346659 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 42.0 | 3.55e-01 | 91.4% | 60.0% |
| 3386423 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.50 | 43.0 | 3.32e-01 | 100.0% | 76.4% |
| 3184191 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.50 | 36.0 | 2.62e-01 | 79.3% | 47.8% |