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JN638751.1__AEO93668.1__G_410__00402
Bact-VirJN638751.1__AEO93668.1__G_410__00402
Identity
- Accession:
- JN638751 ↗
- Kingdom:
- phage
Quality
83.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-103
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.67 | 42.0 | 3.60e-01 | 75.9% | 41.3% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.63 | 43.0 | 3.48e-01 | 71.1% | 40.6% |
| 2yfoA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.63 | 45.0 | 3.05e-01 | 75.9% | 94.8% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.63 | 42.0 | 3.39e-01 | 74.7% | 36.9% |
| 3ot2A00 | 3.90.1570.10 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A | 0.60 | 44.0 | 3.51e-01 | 79.5% | 69.8% |
| 1p49A03 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 40.0 | 3.68e-01 | 71.1% | 67.6% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.58 | 44.0 | 3.55e-01 | 81.9% | 80.9% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.58 | 49.0 | 4.36e-01 | 94.0% | 74.8% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.57 | 41.0 | 3.69e-01 | 77.1% | 61.9% |
| 3b8bA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.56 | 40.0 | 3.26e-01 | 75.9% | 47.2% |
| 4geqB00 | 3.30.160.430 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 35.0 | 4.06e-01 | 83.1% | 89.7% |
| 2ghsA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 45.0 | 3.19e-01 | 96.4% | 87.8% |
| 3g4eA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 46.0 | 3.27e-01 | 100.0% | 87.9% |
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.54 | 37.0 | 3.62e-01 | 73.5% | 64.1% |
| 3v0rA01 | 2.40.350.20 | Mainly Beta › Beta Barrel › AOC barrel-like › | 0.54 | 40.0 | 3.58e-01 | 79.5% | 65.8% |
| 5c2vB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.95e-01 | 91.6% | 65.6% |
| 7n3yC01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 48.0 | 3.15e-01 | 100.0% | 94.3% |
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 38.0 | 2.61e-01 | 75.9% | 28.8% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 39.0 | 2.63e-01 | 77.1% | 49.5% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 44.0 | 3.21e-01 | 98.8% | 93.5% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 39.0 | 3.54e-01 | 79.5% | 63.2% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 3.11e-01 | 97.6% | 82.9% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.52 | 43.0 | 2.56e-01 | 91.6% | 53.5% |
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.52 | 42.0 | 4.02e-01 | 86.7% | 96.9% |
| 4ad8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 2.74e-01 | 81.9% | 43.3% |
| 5o7oC01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 36.0 | 3.19e-01 | 73.5% | 87.2% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 41.0 | 2.92e-01 | 90.4% | 62.0% |
| 1jmxB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.91e-01 | 95.2% | 72.3% |
| 1pbyB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.94e-01 | 100.0% | 98.8% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 43.0 | 2.99e-01 | 100.0% | 58.5% |
| 1nr0A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 38.0 | 2.55e-01 | 79.5% | 91.3% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4247302 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.68 | 42.0 | 4.15e-01 | 80.7% | 57.8% |
| 3931562 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.67 | 42.0 | 3.01e-01 | 75.9% | 23.1% |
| 3704327 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.65 | 42.0 | 4.52e-01 | 77.1% | 77.1% |
| 3741285 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.64 | 43.0 | 4.12e-01 | 75.9% | 60.0% |
| 4525958 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.62 | 52.0 | 4.79e-01 | 96.4% | 70.4% |
| 2487568 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.61 | 48.0 | 4.32e-01 | 90.4% | 60.2% |
| 4300905 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.60 | 43.0 | 3.26e-01 | 74.7% | 45.3% |
| 3632963 | 844.1.1.3 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF6593 | 0.60 | 49.0 | 3.89e-01 | 86.7% | 69.7% |
| 140944 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.60 | 44.0 | 3.51e-01 | 79.5% | 69.8% |
| 4026983 | 604.1.1.135 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 | 0.58 | 47.0 | 3.47e-01 | 88.0% | 71.4% |
| 4646896 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.58 | 40.0 | 2.84e-01 | 72.3% | 58.9% |
| 1677788 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.58 | 43.0 | 4.22e-01 | 78.3% | 76.1% |
| 3841271 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.57 | 42.0 | 3.14e-01 | 78.3% | 74.9% |
| 3399942 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.57 | 41.0 | 3.64e-01 | 75.9% | 70.8% |
| 1546248 | 5.1.3.29 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF4221 | 0.57 | 41.0 | 2.67e-01 | 75.9% | 77.1% |
| 4928787 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.57 | 34.0 | 3.51e-01 | 72.3% | 62.5% |
| 3536576 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.57 | 42.0 | 4.17e-01 | 77.1% | 85.9% |
| 3933126 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.57 | 47.0 | 3.07e-01 | 97.6% | 96.3% |
| 3900097 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.56 | 41.0 | 3.50e-01 | 77.1% | 49.6% |
| 3335997 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.56 | 41.0 | 3.59e-01 | 79.5% | 97.7% |
| 1174175 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.55 | 40.0 | 3.26e-01 | 77.1% | 46.5% |
| 5068015 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.55 | 31.0 | 3.28e-01 | 72.3% | 61.3% |
| 4834004 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.55 | 38.0 | 3.74e-01 | 72.3% | 81.1% |
| 3752942 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.53 | 47.0 | 3.21e-01 | 97.6% | 77.3% |
| 3192570 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.52 | 40.0 | 2.65e-01 | 84.3% | 45.2% |
| 3593777 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 41.0 | 2.49e-01 | 84.3% | 34.0% |
| 4045712 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.52 | 45.0 | 3.20e-01 | 97.6% | 76.2% |
| 3591336 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 38.0 | 3.46e-01 | 78.3% | 93.9% |
| 4273033 | 3894.1.1.2 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD | 0.52 | 37.0 | 3.29e-01 | 75.9% | 55.2% |
| 3242234 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 41.0 | 2.57e-01 | 89.2% | 26.7% |
| 4440945 | 5.1.3.48 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 | 0.51 | 40.0 | 2.86e-01 | 90.4% | 82.5% |
| 3917386 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.51 | 43.0 | 3.38e-01 | 92.8% | 77.1% |
| 4955147 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.51 | 40.0 | 2.58e-01 | 81.9% | 20.0% |
| 4402089 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.51 | 40.0 | 2.31e-01 | 90.4% | 18.9% |
| 3592074 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 39.0 | 2.32e-01 | 89.2% | 26.9% |
| 3599279 | 10.15.1.0 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like | 0.50 | 37.0 | 3.25e-01 | 78.3% | 73.1% |
| 5037435 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.50 | 41.0 | 2.71e-01 | 92.8% | 98.0% |
| 3630137 | 883.1.1.15 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C | 0.50 | 44.0 | 2.75e-01 | 97.6% | 33.0% |
| 3718321 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 42.0 | 2.71e-01 | 100.0% | 25.5% |