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JN638751.1__AEO93859.1__G_614__00595
Bact-VirJN638751.1__AEO93859.1__G_614__00595
Identity
- Accession:
- JN638751 ↗
- Kingdom:
- phage
Quality
68.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-131
Domain cluster:
rep: NC_073468.1__YP_010755053.1__QEH42_gp022__00022__D1-164
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.56 | 25.0 | 3.51e-01 | 87.4% | 90.9% |
| 1dq3A02 | 3.30.160.90 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 25.0 | 3.14e-01 | 81.1% | 72.4% |
| 2r6zA01 | 3.40.1630.10 | Alpha Beta › 3-Layer(aba) Sandwich › S-adenosyl-L-methionine-dependent methyltransferases › YhiQ-like domain | 0.53 | 25.0 | 3.46e-01 | 82.7% | 100.0% |
| 2kumA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 21.0 | 2.99e-01 | 77.2% | 78.9% |
| 2dafA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 26.0 | 3.20e-01 | 100.0% | 77.6% |
| 1vbkA02 | 3.30.2300.10 | Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily | 0.51 | 24.0 | 2.96e-01 | 75.6% | 69.5% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 22.0 | 2.40e-01 | 76.4% | 41.3% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 35.0 | 2.61e-01 | 100.0% | 27.1% |
| 5jrjA02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.50 | 22.0 | 2.96e-01 | 79.5% | 79.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4206587 | 2007.1.2.47 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DabA | 0.59 | 40.0 | 3.64e-01 | 70.9% | 91.4% |
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.58 | 22.0 | 3.59e-01 | 81.9% | 100.0% |
| 3566967 | 220.1.1.170 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin | 0.55 | 29.0 | 3.14e-01 | 91.3% | 60.0% |
| 3415741 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.55 | 33.0 | 3.22e-01 | 84.3% | 51.7% |
| 3214720 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 25.0 | 2.85e-01 | 80.3% | 53.7% |
| 4675977 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 30.0 | 3.82e-01 | 93.7% | 94.7% |
| 5067600 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.52 | 25.0 | 3.03e-01 | 78.0% | 67.5% |
| 4927799 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.52 | 25.0 | 2.89e-01 | 81.1% | 60.0% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.52 | 35.0 | 4.06e-01 | 93.7% | 97.7% |
| 5079456 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.51 | 34.0 | 3.09e-01 | 84.3% | 47.2% |
| 3637723 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 34.0 | 2.43e-01 | 100.0% | 21.8% |
| 3970156 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.51 | 29.0 | 3.05e-01 | 96.9% | 59.1% |
| 5054301 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.50 | 35.0 | 3.90e-01 | 97.6% | 93.7% |
D2
high
residues 136-234