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JN638751.1__AEO93869.1__G_624__00605

Bact-Vir

JN638751.1__AEO93869.1__G_624__00605

Identity

Accession:
JN638751 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Donellivirus› Bacillus_phage_G

TaxID: 2884420

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-49
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.82 57.0 4.43e-01 75.0% 40.0%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.80 57.0 4.54e-01 75.0% 43.4%
1xqrA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.78 55.0 3.29e-01 75.0% 13.9%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.77 54.0 5.21e-01 75.0% 82.2%
2jdiH02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.75 53.0 5.26e-01 75.0% 71.4%
1o9gA02 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.75 53.0 5.20e-01 75.0% 83.7%
1ma1A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.75 53.0 4.51e-01 75.0% 62.5%
3q23A04 6.10.140.1370 Special › Helix non-globular › Helix Hairpins › 0.73 61.0 4.75e-01 97.5% 44.0%
1fcqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 58.0 3.41e-01 95.0% 11.5%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 65.0 5.20e-01 100.0% 94.7%
2z3xA00 6.10.10.80 Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like 0.70 57.0 5.19e-01 95.0% 83.9%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 59.0 3.76e-01 100.0% 88.0%
3obfA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.68 54.0 3.67e-01 97.5% 39.8%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.67 55.0 4.60e-01 97.5% 54.5%
3qkaE02 1.10.287.2460 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 46.0 4.60e-01 77.5% 79.1%
1gkuB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 3.56e-01 100.0% 82.8%
3cl3A01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.64 52.0 4.19e-01 95.0% 47.6%
2vyrA00 1.10.245.10 Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain 0.60 45.0 3.82e-01 97.5% 47.1%
4fd4A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 49.0 3.13e-01 100.0% 63.2%
4v19K02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.58 46.0 3.76e-01 87.5% 48.0%
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.54 41.0 3.85e-01 92.5% 66.0%
1e2tA01 6.10.140.1930 Special › Helix non-globular › Helix Hairpins › 0.54 39.0 3.42e-01 85.0% 47.9%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407017 130.1.1.2 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM 0.91 68.0 6.55e-01 80.0% 77.8%
3251186 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.90 79.0 7.34e-01 100.0% 80.0%
3561352 130.1.1.2 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM 0.89 80.0 7.41e-01 100.0% 86.0%
3275813 1134.1.2.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain 0.89 78.0 7.29e-01 100.0% 80.0%
3385504 872.11.1.1 ↗ a+b two layers › Dodecin subunit-like › Hypothetical protein FTT_1539c › Hypothetical protein FTT_1539c › DUF6844 0.89 78.0 4.43e-01 100.0% 10.4%
3769015 130.1.1.2 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM 0.89 68.0 6.27e-01 82.5% 72.0%
5031256 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.88 75.0 6.76e-01 100.0% 69.1%
3266211 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.88 77.0 7.19e-01 100.0% 80.0%
3989824 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.85 59.0 5.41e-01 72.5% 66.0%
3256790 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.85 73.0 6.29e-01 100.0% 61.5%
4984419 2498.1.1.10 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.85 60.0 3.62e-01 75.0% 13.3%
3256378 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.84 72.0 7.03e-01 100.0% 88.9%
3231243 4177.1.1.10 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH 0.82 59.0 3.50e-01 77.5% 11.4%
3268369 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.81 64.0 4.73e-01 85.0% 46.3%
3925160 9.26.1.0 ↗ beta barrels › Lipocalins/Streptavidin 0.80 57.0 3.56e-01 75.0% 17.9%
4054690 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.76 52.0 5.05e-01 87.5% 64.4%
None — 0.74 61.0 3.39e-01 95.0% 7.7%
4010451 3788.1.1.15 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 0.73 64.0 5.22e-01 100.0% 85.3%
3488883 3447.1.1.2 ↗ alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ICMT 0.69 60.0 3.60e-01 100.0% 31.2%
5004067 192.3.1.1 ↗ alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Sod_Fe_N 0.67 53.0 4.15e-01 87.5% 43.5%
3874130 133.1.1.5 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › DH_Alsin 0.67 54.0 3.52e-01 100.0% 30.5%
4137553 109.62.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain › AFF4_CHD 0.67 58.0 3.59e-01 97.5% 95.5%
3245021 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.64 51.0 4.11e-01 97.5% 47.8%
3388513 130.1.1.2 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM 0.58 44.0 4.25e-01 95.0% 76.0%
3389375 130.1.1.2 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM 0.56 40.0 4.02e-01 87.5% 85.0%
4492160 3121.1.1.0 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain 0.54 46.0 3.64e-01 97.5% 65.9%