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JN638751.1__AEO93895.1__G_652__00633
Bact-VirJN638751.1__AEO93895.1__G_652__00633
Identity
- Accession:
- JN638751 ↗
- Kingdom:
- phage
Quality
59.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 122-198
Domain cluster:
rep: MH248138.1__AWY08536.1__Alexandra_279__00277__D12-80
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.88 | 59.0 | 6.60e-01 | 75.3% | 85.5% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.84 | 62.0 | 5.51e-01 | 76.6% | 67.3% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 53.0 | 5.83e-01 | 71.4% | 79.4% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 51.0 | 6.14e-01 | 71.4% | 96.1% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 54.0 | 6.22e-01 | 72.7% | 93.0% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 54.0 | 5.50e-01 | 81.8% | 71.4% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 48.0 | 5.89e-01 | 71.4% | 100.0% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 48.0 | 5.17e-01 | 71.4% | 76.9% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 49.0 | 5.15e-01 | 83.1% | 76.5% |
| 4mdwA00 | 2.30.30.1210 | Mainly Beta › Roll › SH3 type barrels. › Domain of unknown function DUF1541 | 0.73 | 49.0 | 3.98e-01 | 70.1% | 81.5% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.72 | 49.0 | 4.51e-01 | 70.1% | 62.9% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 50.0 | 5.59e-01 | 71.4% | 96.7% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 46.0 | 5.13e-01 | 72.7% | 84.7% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 51.0 | 5.73e-01 | 74.0% | 96.7% |
| 2ky9A01 | 2.30.30.1130 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 5.44e-01 | 74.0% | 85.1% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 50.0 | 5.33e-01 | 72.7% | 89.6% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 49.0 | 5.28e-01 | 79.2% | 84.6% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 48.0 | 3.92e-01 | 71.4% | 40.6% |
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 50.0 | 4.30e-01 | 76.6% | 48.7% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.68 | 47.0 | 4.19e-01 | 72.7% | 51.8% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.68 | 47.0 | 5.04e-01 | 72.7% | 83.6% |
| 2vc8A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 5.08e-01 | 76.6% | 86.1% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 45.0 | 5.12e-01 | 71.4% | 98.1% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.68 | 47.0 | 3.51e-01 | 72.7% | 30.4% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 52.0 | 5.34e-01 | 81.8% | 90.5% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 55.0 | 4.57e-01 | 88.3% | 82.7% |
| 4epcA02 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 45.0 | 4.75e-01 | 70.1% | 93.0% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 46.0 | 3.72e-01 | 72.7% | 40.4% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 46.0 | 4.72e-01 | 72.7% | 83.6% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 48.0 | 3.96e-01 | 76.6% | 44.0% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 5.23e-01 | 84.4% | 86.8% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.41e-01 | 74.0% | 67.5% |
| 2ew0A00 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.63 | 51.0 | 3.97e-01 | 89.6% | 85.1% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.04e-01 | 85.7% | 62.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 37.0 | 3.90e-01 | 72.7% | 80.3% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 36.0 | 3.79e-01 | 72.7% | 78.5% |
| 3wx1A00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.55 | 37.0 | 3.35e-01 | 70.1% | 98.1% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 38.0 | 3.48e-01 | 75.3% | 87.0% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.95e-01 | 71.4% | 88.9% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.53 | 36.0 | 3.13e-01 | 70.1% | 94.2% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 35.0 | 3.79e-01 | 71.4% | 88.9% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.52 | 39.0 | 3.81e-01 | 83.1% | 74.7% |
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 40.0 | 2.95e-01 | 84.4% | 95.1% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 38.0 | 3.00e-01 | 84.4% | 81.1% |
| 1zc0A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 38.0 | 2.56e-01 | 80.5% | 50.3% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1394554 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.88 | 59.0 | 6.50e-01 | 75.3% | 82.8% |
| 5042892 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.88 | 58.0 | 6.57e-01 | 74.0% | 86.7% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 54.0 | 4.14e-01 | 74.0% | 31.0% |
| 3222146 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.87 | 56.0 | 6.12e-01 | 83.1% | 78.5% |
| 4112177 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.85 | 55.0 | 6.00e-01 | 72.7% | 78.5% |
| 4059465 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.84 | 54.0 | 5.78e-01 | 72.7% | 75.0% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.83 | 55.0 | 6.15e-01 | 77.9% | 86.7% |
| 3486495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 56.0 | 4.14e-01 | 83.1% | 30.9% |
| 4932609 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 56.0 | 6.03e-01 | 83.1% | 83.1% |
| 4547820 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 55.0 | 4.91e-01 | 83.1% | 51.4% |
| 4203592 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 52.0 | 5.63e-01 | 71.4% | 78.5% |
| 3703932 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 53.0 | 6.00e-01 | 72.7% | 88.3% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 50.0 | 5.46e-01 | 72.7% | 76.9% |
| 4398865 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.78 | 53.0 | 4.91e-01 | 70.1% | 84.2% |
| 3868602 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.78 | 57.0 | 5.21e-01 | 76.6% | 70.0% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.78 | 49.0 | 5.19e-01 | 72.7% | 71.4% |
| 3922903 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.77 | 52.0 | 5.82e-01 | 79.2% | 88.3% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.76 | 58.0 | 4.94e-01 | 80.5% | 92.5% |
| 3637508 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.76 | 51.0 | 5.49e-01 | 72.7% | 81.5% |
| 3450257 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.74 | 51.0 | 4.68e-01 | 70.1% | 66.3% |
| 3706000 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 56.0 | 5.69e-01 | 79.2% | 93.3% |
| 3627842 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 52.0 | 4.89e-01 | 84.4% | 62.2% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 53.0 | 5.16e-01 | 88.3% | 68.2% |
| 3251940 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.74 | 52.0 | 5.26e-01 | 77.9% | 74.7% |
| 4984882 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.74 | 58.0 | 6.13e-01 | 93.5% | 91.4% |
| 3393347 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 52.0 | 4.97e-01 | 88.3% | 63.3% |
| 3934655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 50.0 | 4.88e-01 | 71.4% | 98.8% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 56.0 | 4.65e-01 | 81.8% | 81.5% |
| 3599257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 53.0 | 5.78e-01 | 77.9% | 90.8% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 51.0 | 4.09e-01 | 72.7% | 41.4% |
| 5054535 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.72 | 52.0 | 4.56e-01 | 76.6% | 52.7% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.72 | 49.0 | 4.98e-01 | 83.1% | 72.0% |
| 4601878 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.71 | 52.0 | 4.25e-01 | 76.6% | 44.6% |
| 3313139 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.70 | 49.0 | 3.68e-01 | 72.7% | 42.9% |
| 3781440 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.70 | 50.0 | 4.95e-01 | 74.0% | 73.8% |
| 3801719 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.70 | 50.0 | 5.22e-01 | 74.0% | 82.9% |
| 5037204 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.70 | 51.0 | 4.33e-01 | 77.9% | 49.2% |
| 3246086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 4.98e-01 | 88.3% | 66.3% |
| 2106291 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.69 | 50.0 | 4.09e-01 | 76.6% | 43.3% |
| 4020511 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 47.0 | 3.88e-01 | 71.4% | 40.7% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 50.0 | 4.62e-01 | 81.8% | 61.1% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 51.0 | 5.21e-01 | 77.9% | 85.3% |
| 3482288 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 57.0 | 5.71e-01 | 88.3% | 94.9% |
| 3195050 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 51.0 | 4.72e-01 | 89.6% | 63.2% |
| 1108456 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.68 | 47.0 | 4.24e-01 | 72.7% | 53.7% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.68 | 48.0 | 4.22e-01 | 83.1% | 50.9% |
| 3586434 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.68 | 48.0 | 3.73e-01 | 72.7% | 36.3% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.68 | 51.0 | 4.06e-01 | 77.9% | 44.8% |
| 166026 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.68 | 49.0 | 5.08e-01 | 76.6% | 86.1% |
| 4565837 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.68 | 49.0 | 4.55e-01 | 88.3% | 61.1% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 49.0 | 4.47e-01 | 88.3% | 59.0% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.67 | 47.0 | 4.52e-01 | 88.3% | 63.3% |
| 3487003 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 49.0 | 4.01e-01 | 76.6% | 43.7% |
| 3819397 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.67 | 50.0 | 4.95e-01 | 80.5% | 76.2% |
| 4936051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 44.0 | 5.13e-01 | 79.2% | 96.4% |
| 3517030 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.66 | 52.0 | 5.31e-01 | 83.1% | 90.7% |
| 3744711 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.66 | 47.0 | 3.58e-01 | 74.0% | 33.5% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 50.0 | 4.66e-01 | 88.3% | 65.3% |
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 48.0 | 4.30e-01 | 88.3% | 56.2% |
| 4105328 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.65 | 48.0 | 5.21e-01 | 92.2% | 92.3% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.65 | 47.0 | 4.21e-01 | 81.8% | 53.6% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 46.0 | 4.94e-01 | 74.0% | 90.8% |
| 3918299 | 4.1.1.376 ↗ | beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th | 0.64 | 44.0 | 4.59e-01 | 70.1% | 77.1% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.64 | 45.0 | 4.88e-01 | 74.0% | 90.8% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 52.0 | 4.67e-01 | 89.6% | 68.2% |
| 3932647 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 47.0 | 4.59e-01 | 77.9% | 75.3% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 50.0 | 5.06e-01 | 83.1% | 85.3% |
| 3407209 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.63 | 45.0 | 3.46e-01 | 74.0% | 33.7% |
| 3789647 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 53.0 | 4.15e-01 | 92.2% | 59.4% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.61 | 47.0 | 4.79e-01 | 100.0% | 86.7% |
| 4537528 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 4.37e-01 | 72.7% | 91.4% |
| 4944615 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.60 | 42.0 | 2.87e-01 | 74.0% | 20.4% |
| 4358168 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.58 | 45.0 | 4.07e-01 | 85.7% | 64.5% |
| 2831853 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.58 | 53.0 | 4.13e-01 | 98.7% | 59.7% |
| 3272992 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 43.0 | 3.56e-01 | 93.5% | 65.8% |
| 3749631 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.52 | 43.0 | 3.83e-01 | 87.0% | 72.4% |
| 4329624 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.52 | 35.0 | 3.26e-01 | 71.4% | 56.2% |
D2
medium
residues 5-59
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.83 | 62.0 | 6.69e-01 | 80.0% | 100.0% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.79 | 54.0 | 4.57e-01 | 70.9% | 73.9% |
| 2ld7A00 | 6.10.160.20 | Special › Helix non-globular › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.78 | 57.0 | 4.76e-01 | 78.2% | 46.8% |
| 3l0oA01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.75 | 56.0 | 5.86e-01 | 83.6% | 89.8% |
| 6yigA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.68 | 53.0 | 4.54e-01 | 85.5% | 80.7% |
| 1jeiA00 | 1.10.720.40 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.68 | 51.0 | 5.23e-01 | 85.5% | 86.8% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.61 | 47.0 | 3.83e-01 | 89.1% | 82.1% |
| 4i43B02 | 3.30.43.40 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain | 0.61 | 42.0 | 3.25e-01 | 70.9% | 57.0% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 4.43e-01 | 89.1% | 80.4% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.59 | 47.0 | 3.17e-01 | 89.1% | 36.7% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.57 | 46.0 | 3.65e-01 | 92.7% | 73.9% |
| 1q8iA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.55 | 44.0 | 3.01e-01 | 89.1% | 55.5% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.54 | 41.0 | 4.15e-01 | 83.6% | 92.9% |
| 1q15D02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 47.0 | 2.97e-01 | 96.4% | 57.5% |
| 1fafA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 39.0 | 3.49e-01 | 78.2% | 63.3% |
| 2v4jA01 | 6.10.140.1420 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 36.0 | 3.50e-01 | 94.5% | 65.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3251186 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.93 | 69.0 | 7.25e-01 | 80.0% | 86.0% |
| 3275813 | 1134.1.2.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain | 0.90 | 61.0 | 6.42e-01 | 70.9% | 78.0% |
| 3256378 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.85 | 62.0 | 6.77e-01 | 80.0% | 95.6% |
| 4433184 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.82 | 65.0 | 6.58e-01 | 85.5% | 90.9% |
| 3784986 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.75 | 54.0 | 5.81e-01 | 76.4% | 97.8% |
| 3252664 | 130.1.1.31 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › RNF34L-like_3rd | 0.75 | 62.0 | 6.30e-01 | 92.7% | 96.4% |
| 3819046 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.73 | 59.0 | 3.94e-01 | 90.9% | 42.5% |
| 4370729 | 629.1.1.1 ↗ | alpha bundles › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › Nitrate_red_del | 0.69 | 48.0 | 3.24e-01 | 74.5% | 25.9% |
| 5062878 | 629.1.1.1 ↗ | alpha bundles › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › Nitrate_red_del | 0.68 | 50.0 | 3.41e-01 | 81.8% | 28.8% |
| 3241387 | 108.1.1.25 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 | 0.67 | 51.0 | 4.22e-01 | 83.6% | 71.0% |
| 3245021 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.64 | 46.0 | 3.96e-01 | 78.2% | 52.2% |
| 3738468 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 50.0 | 4.27e-01 | 85.5% | 76.7% |
| 4283861 | 4993.1.1.3 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatF | 0.62 | 42.0 | 3.25e-01 | 81.8% | 29.6% |
| 3288637 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.57 | 40.0 | 3.59e-01 | 89.1% | 53.3% |
| 3654646 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.57 | 47.0 | 3.32e-01 | 89.1% | 50.0% |
| 3262601 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.55 | 40.0 | 3.41e-01 | 76.4% | 83.5% |
| 4611879 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.55 | 43.0 | 3.29e-01 | 89.1% | 76.4% |
| 3692 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.53 | 39.0 | 3.49e-01 | 78.2% | 63.3% |