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JN662425.1__AEZ50825.1__DC1_0003__00003
Bact-VirJN662425.1__AEZ50825.1__DC1_0003__00003
Identity
- Accession:
- JN662425 ↗
- Kingdom:
- phage
Quality
70.2
mean pLDDT
Taxonomy
TaxID: 2881398
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 227-294
Domain cluster:
representative
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.92 | 63.0 | 7.16e-01 | 70.6% | 94.1% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.89 | 62.0 | 5.95e-01 | 72.1% | 65.3% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.87 | 60.0 | 5.16e-01 | 72.1% | 51.0% |
| 2jg0A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.86 | 69.0 | 4.00e-01 | 83.8% | 26.6% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.86 | 61.0 | 4.86e-01 | 73.5% | 41.9% |
| 2ondA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.85 | 68.0 | 4.25e-01 | 83.8% | 19.8% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 67.0 | 4.96e-01 | 83.8% | 67.7% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.84 | 59.0 | 4.09e-01 | 73.5% | 23.9% |
| 7e9uA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.84 | 67.0 | 3.94e-01 | 83.8% | 29.2% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.84 | 57.0 | 6.56e-01 | 73.5% | 96.0% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.82 | 65.0 | 4.90e-01 | 83.8% | 62.5% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.81 | 64.0 | 4.99e-01 | 83.8% | 65.2% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 57.0 | 5.74e-01 | 73.5% | 75.4% |
| 2p06B00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.81 | 73.0 | 6.69e-01 | 100.0% | 84.1% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 62.0 | 4.79e-01 | 83.8% | 69.4% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 62.0 | 4.75e-01 | 83.8% | 66.9% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.79 | 67.0 | 5.81e-01 | 92.6% | 68.0% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.78 | 53.0 | 4.28e-01 | 70.6% | 98.5% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 65.0 | 4.92e-01 | 88.2% | 65.8% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.78 | 71.0 | 5.88e-01 | 98.5% | 60.2% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 63.0 | 4.60e-01 | 86.8% | 57.1% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.77 | 59.0 | 4.50e-01 | 83.8% | 62.3% |
| 2c2uA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 62.0 | 4.53e-01 | 88.2% | 56.2% |
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 59.0 | 4.56e-01 | 83.8% | 67.1% |
| 4uskA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.76 | 52.0 | 3.94e-01 | 70.6% | 31.2% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.76 | 56.0 | 4.46e-01 | 77.9% | 49.2% |
| 1ah7A00 | 1.10.575.10 | Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease | 0.75 | 68.0 | 4.58e-01 | 100.0% | 73.9% |
| 3craB01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.75 | 64.0 | 5.96e-01 | 98.5% | 75.6% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 62.0 | 5.99e-01 | 91.2% | 83.1% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.74 | 54.0 | 4.50e-01 | 77.9% | 65.5% |
| 4lzgA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.74 | 56.0 | 4.96e-01 | 97.1% | 58.1% |
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.73 | 61.0 | 4.86e-01 | 88.2% | 51.6% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.73 | 65.0 | 6.04e-01 | 95.6% | 84.3% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.73 | 56.0 | 5.41e-01 | 83.8% | 77.9% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.72 | 66.0 | 5.95e-01 | 100.0% | 93.4% |
| 2wwxB00 | 1.20.1260.70 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.72 | 58.0 | 4.11e-01 | 86.8% | 49.0% |
| 4x5mA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.72 | 60.0 | 5.52e-01 | 91.2% | 79.1% |
| 1un8A02 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.71 | 49.0 | 3.50e-01 | 75.0% | 25.5% |
| 1xnfA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 52.0 | 3.45e-01 | 77.9% | 93.1% |
| 7bi4A01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.69 | 52.0 | 3.74e-01 | 88.2% | 29.0% |
| 2gz6A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.69 | 55.0 | 3.43e-01 | 86.8% | 17.7% |
| 4qndA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.68 | 59.0 | 5.23e-01 | 95.6% | 74.2% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.68 | 56.0 | 4.65e-01 | 89.7% | 73.3% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.68 | 57.0 | 4.40e-01 | 95.6% | 43.9% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 51.0 | 5.05e-01 | 83.8% | 84.9% |
| 3fnrA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.67 | 56.0 | 4.46e-01 | 95.6% | 86.2% |
| 2o57A01 | 1.10.287.840 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mycolic acid cyclopropane synthase domain like | 0.66 | 50.0 | 4.42e-01 | 91.2% | 54.3% |
| 6z74C02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.66 | 61.0 | 4.53e-01 | 100.0% | 90.6% |
| 1ileA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.66 | 60.0 | 4.26e-01 | 100.0% | 45.0% |
| 2v0cA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.66 | 61.0 | 4.50e-01 | 100.0% | 48.4% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.65 | 58.0 | 4.29e-01 | 100.0% | 46.9% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.64 | 57.0 | 4.37e-01 | 98.5% | 52.3% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.64 | 58.0 | 4.77e-01 | 100.0% | 62.8% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.64 | 56.0 | 4.66e-01 | 97.1% | 82.9% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.63 | 58.0 | 5.64e-01 | 100.0% | 92.1% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 42.0 | 4.03e-01 | 70.6% | 59.5% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 50.0 | 4.14e-01 | 98.5% | 100.0% |
| 3thxB03 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.60 | 52.0 | 3.89e-01 | 100.0% | 77.2% |
| 1rvkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 51.0 | 4.29e-01 | 97.1% | 71.6% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 50.0 | 4.90e-01 | 100.0% | 90.7% |
| 1ewrA02 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.55 | 49.0 | 4.09e-01 | 100.0% | 64.7% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 46.0 | 3.93e-01 | 95.6% | 57.7% |
| 3g0tA02 | 6.10.120.10 | Special › Helix non-globular › 434 Repressor (Amino-terminal Domain) › Bacterial aspartate aminotransferase, helical domain | 0.50 | 37.0 | 3.74e-01 | 86.8% | 80.0% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999359 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.93 | 65.0 | 5.79e-01 | 72.1% | 54.4% |
| 4426045 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.92 | 64.0 | 4.83e-01 | 72.1% | 35.2% |
| 3599226 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.91 | 63.0 | 4.62e-01 | 72.1% | 31.9% |
| 3576866 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.91 | 63.0 | 4.43e-01 | 72.1% | 27.6% |
| 3960197 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.90 | 63.0 | 4.24e-01 | 72.1% | 23.7% |
| 4974450 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.90 | 62.0 | 4.46e-01 | 72.1% | 29.1% |
| None | — | 0.90 | 63.0 | 3.66e-01 | 75.0% | 9.7% | |
| 5046679 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.88 | 61.0 | 6.07e-01 | 72.1% | 70.0% |
| 5018814 | 3755.3.1.633 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PspA_IM30 | 0.87 | 62.0 | 4.31e-01 | 73.5% | 26.2% |
| 3292425 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.85 | 60.0 | 4.15e-01 | 73.5% | 24.9% |
| 5005597 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.85 | 60.0 | 4.69e-01 | 73.5% | 38.5% |
| 4928617 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.84 | 68.0 | 6.60e-01 | 86.8% | 78.7% |
| 4809272 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.83 | 58.0 | 4.68e-01 | 72.1% | 41.3% |
| 4927171 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.83 | 56.0 | 5.09e-01 | 70.6% | 57.8% |
| 3737294 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.82 | 70.0 | 5.66e-01 | 95.6% | 51.7% |
| 3739669 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.82 | 70.0 | 6.00e-01 | 98.5% | 60.0% |
| 3917160 | 3543.1.1.0 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel | 0.81 | 64.0 | 4.50e-01 | 83.8% | 35.4% |
| 4262515 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.80 | 67.0 | 5.80e-01 | 89.7% | 77.0% |
| 5034342 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.80 | 67.0 | 6.34e-01 | 89.7% | 83.7% |
| 3408110 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.80 | 67.0 | 5.61e-01 | 95.6% | 55.5% |
| 1000511 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.80 | 71.0 | 5.91e-01 | 97.1% | 60.5% |
| 3178110 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.79 | 67.0 | 4.93e-01 | 91.2% | 47.3% |
| 3973839 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.79 | 65.0 | 4.98e-01 | 88.2% | 54.2% |
| 4956941 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.78 | 62.0 | 4.42e-01 | 85.3% | 64.2% |
| 4015157 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.78 | 67.0 | 5.46e-01 | 95.6% | 52.5% |
| 4959463 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.78 | 65.0 | 6.12e-01 | 89.7% | 83.7% |
| 4007316 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.78 | 62.0 | 4.66e-01 | 85.3% | 81.3% |
| 3506410 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.77 | 66.0 | 5.26e-01 | 95.6% | 48.5% |
| 5035734 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.77 | 71.0 | 5.69e-01 | 100.0% | 57.6% |
| 4534092 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 59.0 | 4.30e-01 | 86.8% | 31.1% |
| 4403198 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.77 | 70.0 | 5.56e-01 | 100.0% | 51.5% |
| 4527333 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.77 | 70.0 | 5.47e-01 | 100.0% | 49.6% |
| 3484071 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.76 | 63.0 | 5.09e-01 | 95.6% | 47.7% |
| 4565034 | 159.1.3.3 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › putative NTP pyrophosphohydrolase Exig_1061 › MazG | 0.75 | 67.0 | 5.45e-01 | 98.5% | 56.0% |
| 4929003 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.75 | 63.0 | 5.73e-01 | 91.2% | 74.4% |
| 3394451 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.75 | 62.0 | 4.95e-01 | 89.7% | 53.8% |
| 4027582 | 603.1.1.120 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF846 | 0.75 | 61.0 | 5.05e-01 | 89.7% | 63.3% |
| 5029393 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.75 | 62.0 | 5.67e-01 | 91.2% | 77.5% |
| 3264733 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.74 | 62.0 | 5.56e-01 | 91.2% | 73.7% |
| 5004033 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.74 | 61.0 | 5.55e-01 | 89.7% | 74.4% |
| 3932453 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.74 | 61.0 | 5.09e-01 | 89.7% | 60.9% |
| 3996047 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.74 | 61.0 | 5.90e-01 | 89.7% | 90.7% |
| 3467149 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.74 | 64.0 | 5.20e-01 | 95.6% | 86.4% |
| 5019543 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.73 | 60.0 | 5.30e-01 | 89.7% | 68.0% |
| 1411677 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.73 | 65.0 | 6.04e-01 | 95.6% | 84.3% |
| 3214140 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.73 | 61.0 | 5.33e-01 | 91.2% | 70.0% |
| 4002622 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.73 | 61.0 | 5.23e-01 | 91.2% | 66.7% |
| 4023890 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.73 | 65.0 | 6.18e-01 | 100.0% | 98.7% |
| 3667914 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.73 | 60.0 | 5.23e-01 | 89.7% | 67.0% |
| 3245201 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.72 | 61.0 | 4.75e-01 | 91.2% | 50.0% |
| 3256234 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.72 | 60.0 | 5.58e-01 | 91.2% | 82.4% |
| 3244940 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.72 | 60.0 | 5.45e-01 | 91.2% | 77.8% |
| 3256571 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.72 | 60.0 | 5.35e-01 | 91.2% | 74.7% |
| 3330676 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.72 | 60.0 | 5.44e-01 | 91.2% | 77.8% |
| 5055868 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.72 | 59.0 | 5.75e-01 | 89.7% | 88.0% |
| 3210969 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.72 | 59.0 | 5.31e-01 | 91.2% | 73.7% |
| 3627770 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.72 | 60.0 | 4.87e-01 | 91.2% | 56.0% |
| 3404235 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.71 | 60.0 | 4.86e-01 | 91.2% | 56.0% |
| 3534927 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.71 | 60.0 | 4.84e-01 | 91.2% | 56.0% |
| 1713334 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.71 | 58.0 | 4.87e-01 | 89.7% | 59.0% |
| 3791287 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.71 | 59.0 | 5.40e-01 | 91.2% | 77.8% |
| 3628101 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.71 | 60.0 | 4.83e-01 | 91.2% | 56.0% |
| 3436288 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.70 | 57.0 | 4.62e-01 | 89.7% | 53.1% |
| 4025145 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.70 | 59.0 | 4.84e-01 | 91.2% | 58.3% |
| 3938825 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.70 | 57.0 | 5.30e-01 | 89.7% | 81.2% |
| 3699643 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.70 | 58.0 | 5.38e-01 | 91.2% | 82.4% |
| 1490311 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.70 | 58.0 | 5.32e-01 | 91.2% | 76.4% |
| 3798925 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.70 | 57.0 | 5.31e-01 | 89.7% | 81.2% |
| 3601017 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.69 | 57.0 | 5.33e-01 | 91.2% | 82.4% |
| 4200933 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.69 | 56.0 | 5.05e-01 | 89.7% | 72.6% |
| 3395673 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.69 | 59.0 | 4.24e-01 | 100.0% | 34.4% |
| 5023828 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.69 | 62.0 | 5.61e-01 | 97.1% | 75.0% |
| 4025161 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.69 | 56.0 | 5.36e-01 | 89.7% | 86.3% |
| 3239689 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.69 | 56.0 | 4.85e-01 | 89.7% | 66.7% |
| 1388514 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.68 | 59.0 | 5.23e-01 | 95.6% | 74.2% |
| 3245192 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.68 | 56.0 | 5.23e-01 | 91.2% | 82.4% |
| 3507421 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.68 | 56.0 | 5.61e-01 | 91.2% | 98.6% |
| 3590589 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.67 | 62.0 | 5.61e-01 | 100.0% | 94.4% |
| 5028219 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.67 | 62.0 | 5.59e-01 | 100.0% | 88.9% |
| 5037258 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.66 | 60.0 | 4.35e-01 | 100.0% | 95.6% |
| None | — | 0.65 | 59.0 | 4.23e-01 | 100.0% | 43.2% | |
| 5014073 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.64 | 56.0 | 4.99e-01 | 95.6% | 87.4% |
| 5054157 | 632.11.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 | 0.63 | 58.0 | 5.67e-01 | 100.0% | 94.7% |
| 5029371 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.62 | 56.0 | 5.29e-01 | 98.5% | 96.2% |
D2
medium
residues 8-99
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 37.0 | 4.37e-01 | 96.7% | 85.5% |
| 8amzT01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 50.0 | 3.69e-01 | 95.7% | 33.7% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 31.0 | 3.57e-01 | 88.0% | 72.1% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 35.0 | 3.76e-01 | 95.7% | 76.6% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 30.0 | 3.39e-01 | 92.4% | 72.1% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.51 | 34.0 | 3.77e-01 | 96.7% | 90.1% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 26.0 | 3.20e-01 | 100.0% | 79.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 43.0 | 5.67e-01 | 100.0% | 87.0% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 45.0 | 6.12e-01 | 96.7% | 98.0% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 48.0 | 5.22e-01 | 70.7% | 74.0% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.77 | 51.0 | 4.41e-01 | 97.8% | 45.0% |
| 3448128 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.63 | 59.0 | 5.11e-01 | 100.0% | 80.0% |
| 3204772 | 192.1.1.31 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › Cep57_MT_bd | 0.60 | 36.0 | 3.50e-01 | 96.7% | 53.0% |
| 3454123 | 3493.1.1.0 ↗ | extended segments › Photosystem II PsbX protein › Photosystem II PsbX protein › Photosystem II PsbX protein | 0.59 | 35.0 | 3.97e-01 | 95.7% | 81.5% |
| 4017817 | 3922.1.1.229 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Cep57_MT_bd | 0.59 | 35.0 | 3.06e-01 | 96.7% | 37.9% |
| None | — | 0.59 | 54.0 | 4.81e-01 | 100.0% | 82.4% | |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.58 | 54.0 | 3.72e-01 | 100.0% | 35.8% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.58 | 54.0 | 3.66e-01 | 100.0% | 34.5% |
| 3849660 | 11.2.1.25 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48 | 0.58 | 34.0 | 3.04e-01 | 93.5% | 40.8% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.58 | 53.0 | 3.66e-01 | 100.0% | 35.6% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.57 | 53.0 | 4.59e-01 | 100.0% | 77.2% |
| 3651054 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.57 | 52.0 | 4.33e-01 | 100.0% | 61.9% |
| 3359799 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.57 | 52.0 | 4.58e-01 | 100.0% | 78.9% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.57 | 52.0 | 4.73e-01 | 100.0% | 82.5% |
| 3421939 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.56 | 51.0 | 4.62e-01 | 100.0% | 80.8% |
| 2968802 | 101.15.1.11 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP | 0.56 | 52.0 | 4.47e-01 | 100.0% | 71.0% |
| 3656643 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.56 | 51.0 | 4.50e-01 | 100.0% | 77.0% |
| 3819870 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.56 | 52.0 | 4.49e-01 | 100.0% | 77.8% |
| 3671032 | 101.15.1.11 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_NFP | 0.56 | 51.0 | 4.17e-01 | 100.0% | 60.6% |
| 3319482 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.55 | 51.0 | 4.56e-01 | 100.0% | 80.8% |
| 3609224 | 3602.1.1.3 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Enkurin | 0.55 | 32.0 | 3.43e-01 | 96.7% | 65.0% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.55 | 51.0 | 4.84e-01 | 100.0% | 95.2% |
| 3385728 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.55 | 45.0 | 4.12e-01 | 88.0% | 100.0% |
| 3573655 | 108.1.1.177 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6, EF-hand_7, NUCB1_N | 0.55 | 44.0 | 3.18e-01 | 88.0% | 53.1% |
D3
medium
residues 116-198