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JN672684.1__AEQ39242.1__X__00069
Bact-VirJN672684.1__AEQ39242.1__X__00069
Identity
- Accession:
- JN672684 ↗
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Taxonomy
TaxID: 2886900
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-93
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.62 | 50.0 | 4.07e-01 | 88.9% | 71.0% |
| 2aehA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 42.0 | 3.67e-01 | 70.8% | 71.2% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 50.0 | 4.39e-01 | 93.1% | 96.5% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.61 | 44.0 | 3.87e-01 | 100.0% | 49.6% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.61 | 41.0 | 4.07e-01 | 70.8% | 71.4% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.60e-01 | 87.5% | 93.3% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 51.0 | 4.63e-01 | 98.6% | 90.2% |
| 5wfiA01 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 43.0 | 3.66e-01 | 100.0% | 45.5% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.73e-01 | 84.7% | 92.4% |
| 4f3nA00 | 3.40.50.12710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 2.82e-01 | 81.9% | 72.2% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 45.0 | 3.94e-01 | 90.3% | 81.5% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.58 | 46.0 | 3.41e-01 | 90.3% | 91.7% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 47.0 | 3.78e-01 | 93.1% | 75.3% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.58 | 46.0 | 3.71e-01 | 94.4% | 71.5% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 4.59e-01 | 87.5% | 95.5% |
| 4z04A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 38.0 | 3.23e-01 | 100.0% | 40.3% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 50.0 | 3.33e-01 | 100.0% | 30.3% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 49.0 | 3.24e-01 | 100.0% | 35.9% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 38.0 | 4.19e-01 | 76.4% | 100.0% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 49.0 | 3.31e-01 | 100.0% | 30.7% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.56 | 47.0 | 4.64e-01 | 98.6% | 100.0% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 4.32e-01 | 77.8% | 98.2% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 3.94e-01 | 70.8% | 93.5% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 44.0 | 4.56e-01 | 97.2% | 100.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.55 | 39.0 | 3.49e-01 | 77.8% | 58.7% |
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.87e-01 | 98.6% | 67.4% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 42.0 | 3.53e-01 | 87.5% | 63.1% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.65e-01 | 100.0% | 70.8% |
| 7knlA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.51 | 38.0 | 3.28e-01 | 79.2% | 80.7% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.24e-01 | 97.2% | 73.8% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.50 | 28.0 | 3.20e-01 | 72.2% | 89.7% |
| 4h63Q04 | 3.90.1150.120 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.50 | 39.0 | 3.42e-01 | 87.5% | 82.8% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 54.0 | 5.08e-01 | 84.7% | 94.4% |
| 4954284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 46.0 | 4.95e-01 | 95.8% | 91.7% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 51.0 | 5.18e-01 | 88.9% | 90.0% |
| 4342488 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 49.0 | 5.15e-01 | 98.6% | 96.8% |
| 160388 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.64 | 49.0 | 4.24e-01 | 86.1% | 87.1% |
| 4149821 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 5.04e-01 | 87.5% | 98.3% |
| 4940501 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 47.0 | 4.90e-01 | 84.7% | 89.2% |
| 4151014 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.63 | 48.0 | 5.12e-01 | 95.8% | 100.0% |
| 4963446 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.75e-01 | 77.8% | 96.9% |
| 3929881 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.62 | 42.0 | 3.64e-01 | 70.8% | 68.7% |
| 4429179 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 38.0 | 4.41e-01 | 72.2% | 100.0% |
| 4432348 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 48.0 | 4.98e-01 | 100.0% | 94.1% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.90e-01 | 95.8% | 98.3% |
| 139950 | 4.1.1.126 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5608 | 0.61 | 44.0 | 4.81e-01 | 81.9% | 100.0% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.61 | 43.0 | 4.68e-01 | 91.7% | 96.4% |
| 2772566 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.61 | 44.0 | 3.83e-01 | 100.0% | 49.1% |
| 3976863 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.60 | 44.0 | 3.95e-01 | 100.0% | 54.3% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.60 | 48.0 | 4.26e-01 | 100.0% | 60.0% |
| 4550511 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.60 | 37.0 | 4.32e-01 | 81.9% | 100.0% |
| 4525683 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.60 | 43.0 | 3.76e-01 | 100.0% | 47.5% |
| 3942297 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.60 | 43.0 | 3.84e-01 | 100.0% | 50.4% |
| 5036621 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 4.60e-01 | 79.2% | 100.0% |
| 3177299 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 51.0 | 3.20e-01 | 100.0% | 25.6% |
| 3171545 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.58 | 50.0 | 3.27e-01 | 100.0% | 28.9% |
| 3750815 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 51.0 | 3.24e-01 | 100.0% | 28.4% |
| 3630851 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 51.0 | 3.20e-01 | 100.0% | 26.0% |
| 3512537 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 41.0 | 3.58e-01 | 75.0% | 75.7% |
| 3179039 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 50.0 | 3.20e-01 | 100.0% | 27.2% |
| 3508437 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 50.0 | 3.23e-01 | 100.0% | 30.4% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.57 | 44.0 | 4.24e-01 | 87.5% | 82.4% |
| 3654499 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.57 | 43.0 | 3.65e-01 | 81.9% | 80.0% |
| 3701268 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 49.0 | 3.17e-01 | 100.0% | 28.9% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 45.0 | 4.71e-01 | 98.6% | 100.0% |
| 3311685 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.56 | 49.0 | 3.60e-01 | 100.0% | 35.1% |
| 3732856 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.56 | 49.0 | 3.12e-01 | 100.0% | 27.2% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.55e-01 | 91.7% | 98.4% |
| 3704833 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.56 | 48.0 | 3.23e-01 | 100.0% | 27.7% |
| 3236014 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.56 | 48.0 | 3.17e-01 | 100.0% | 28.9% |
| 3588517 | 216.1.1.28 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Prok-E2_B | 0.55 | 39.0 | 3.37e-01 | 75.0% | 83.3% |
| 5034040 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 4.19e-01 | 75.0% | 98.2% |
| 3396002 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 37.0 | 2.82e-01 | 73.6% | 62.4% |
| 4649925 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.54 | 41.0 | 3.09e-01 | 86.1% | 33.7% |
| 3486734 | 220.1.1.119 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th | 0.54 | 39.0 | 3.36e-01 | 79.2% | 87.9% |
| 3325360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 40.0 | 4.09e-01 | 83.3% | 85.5% |
| 4020605 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.53 | 39.0 | 3.74e-01 | 80.6% | 89.4% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 44.0 | 4.08e-01 | 100.0% | 87.4% |
| None | — | 0.51 | 42.0 | 2.41e-01 | 91.7% | 88.1% | |
| 3472687 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.50 | 36.0 | 2.57e-01 | 77.8% | 82.7% |