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JN698994.1__AER47562.1__DS6A_8__00008
Bact-VirJN698994.1__AER47562.1__DS6A_8__00008
Identity
- Accession:
- JN698994 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Taxonomy
TaxID: 45764
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04957.19 best | RMF | 41.2 | 1.90e-10 | 97.9% | 79.2% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c5aA00 | 1.20.91.20 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) | 0.80 | 71.0 | 6.39e-01 | 100.0% | 80.0% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 50.0 | 3.96e-01 | 70.8% | 82.8% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 50.0 | 3.76e-01 | 70.8% | 32.7% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.73 | 62.0 | 4.86e-01 | 100.0% | 64.5% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.71 | 60.0 | 5.04e-01 | 100.0% | 78.7% |
| 6fahC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.71 | 61.0 | 4.62e-01 | 100.0% | 63.0% |
| 1bucA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.71 | 59.0 | 4.48e-01 | 97.9% | 54.5% |
| 5zw7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.68 | 46.0 | 3.26e-01 | 70.8% | 28.3% |
| 3fkjA02 | 1.10.10.2240 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 55.0 | 5.08e-01 | 97.9% | 84.4% |
| 2looA02 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.65 | 50.0 | 4.53e-01 | 93.8% | 94.7% |
| 4dgwB01 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.64 | 51.0 | 5.09e-01 | 95.8% | 94.0% |
| 6idxA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 53.0 | 3.54e-01 | 100.0% | 46.1% |
| 1pj5A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 48.0 | 3.14e-01 | 87.5% | 79.2% |
| 1svmA01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.63 | 51.0 | 4.36e-01 | 100.0% | 96.7% |
| 1c6rA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.63 | 49.0 | 4.05e-01 | 85.4% | 95.5% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.63 | 51.0 | 3.64e-01 | 97.9% | 43.7% |
| 2qkdA04 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.62 | 45.0 | 3.32e-01 | 77.1% | 48.8% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 45.0 | 3.74e-01 | 79.2% | 72.5% |
| 4dkcB00 | 1.20.1250.80 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 | 0.59 | 50.0 | 3.48e-01 | 95.8% | 52.5% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 51.0 | 3.12e-01 | 97.9% | 16.8% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 41.0 | 3.55e-01 | 77.1% | 62.2% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 44.0 | 3.20e-01 | 93.8% | 31.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3213789 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.81 | 70.0 | 6.76e-01 | 97.9% | 92.7% |
| 3264888 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 65.0 | 5.73e-01 | 100.0% | 68.6% |
| 3245517 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.73 | 54.0 | 5.80e-01 | 83.3% | 97.5% |
| 3731535 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.72 | 50.0 | 3.87e-01 | 72.9% | 47.0% |
| 3563979 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.65 | 48.0 | 3.32e-01 | 85.4% | 25.5% |
| 4004019 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.62 | 50.0 | 3.49e-01 | 89.6% | 38.1% |
| 5046384 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.61 | 52.0 | 3.54e-01 | 95.8% | 70.3% |
| 3963346 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.61 | 53.0 | 4.73e-01 | 100.0% | 72.9% |
| 3743821 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.60 | 46.0 | 3.19e-01 | 81.2% | 27.6% |
| 3359550 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.59 | 47.0 | 2.86e-01 | 91.7% | 12.9% |
| 3380603 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 42.0 | 4.27e-01 | 85.4% | 93.3% |
| 3941632 | 1051.1.1.0 ↗ | alpha superhelices › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain | 0.57 | 46.0 | 3.68e-01 | 93.8% | 45.7% |
| 3634542 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 48.0 | 3.38e-01 | 97.9% | 100.0% |
| 3646855 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.57 | 43.0 | 4.43e-01 | 95.8% | 100.0% |
| 5026211 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.56 | 42.0 | 3.03e-01 | 91.7% | 38.3% |
| 3176114 | 177.1.1.1 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Zn_dep_PLPC | 0.56 | 43.0 | 2.77e-01 | 81.2% | 19.0% |
| 3988683 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.54 | 47.0 | 4.55e-01 | 100.0% | 96.4% |
| 3342751 | 376.1.3.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › NSD_PHD | 0.52 | 42.0 | 2.96e-01 | 89.6% | 30.7% |