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JN700520.2__AFD22238.1__X__00025
Bact-VirJN700520.2__AFD22238.1__X__00025
Identity
- Accession:
- JN700520 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-56
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i2lB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 41.0 | 3.88e-01 | 92.6% | 83.8% |
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.51 | 35.0 | 3.79e-01 | 100.0% | 88.9% |
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.50 | 39.0 | 3.81e-01 | 92.6% | 77.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2028815 | 4988.1.1.0 ↗ | a+b two layers › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain | 0.69 | 39.0 | 3.50e-01 | 79.6% | 39.5% |
| 3608088 | 3493.1.1.0 ↗ | extended segments › Photosystem II PsbX protein › Photosystem II PsbX protein › Photosystem II PsbX protein | 0.68 | 36.0 | 4.07e-01 | 83.3% | 100.0% |
| 4944735 | 101.1.2.542 ↗ | alpha arrays › HTH › HTH › winged helix domain › ATPase_2 | 0.64 | 50.0 | 3.96e-01 | 90.7% | 44.8% |
| 3419380 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.57 | 44.0 | 4.04e-01 | 85.2% | 70.0% |
| 4354291 | 246.2.1.14 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › FBPase_2 | 0.55 | 37.0 | 2.35e-01 | 72.2% | 20.0% |
| 3929994 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.54 | 34.0 | 2.92e-01 | 98.1% | 36.8% |
| 4094622 | 3687.1.1.0 ↗ | alpha bundles › NADPH-cytochrome p450 reductase helical insertion domain › NADPH-cytochrome p450 reductase helical insertion domain › NADPH-cytochrome p450 reductase helical insertion domain | 0.51 | 43.0 | 3.59e-01 | 96.3% | 91.0% |
| 3710871 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.50 | 40.0 | 2.68e-01 | 96.3% | 91.1% |
| 3686933 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 35.0 | 2.47e-01 | 72.2% | 58.9% |
| 3182978 | 243.7.1.1 ↗ | a+b two layers › Cystatin-like › Cytochrome b5-like heme/steroid binding domain › Cytochrome b5-like heme/steroid binding domain › Cyt-b5 | 0.50 | 36.0 | 3.55e-01 | 98.1% | 75.0% |