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JN712910.1__AEZ50467.1__BCD7_0020__00020
Bact-VirJN712910.1__AEZ50467.1__BCD7_0020__00020
Identity
- Accession:
- JN712910 ↗
- Kingdom:
- phage
Quality
54.6
mean pLDDT
Taxonomy
TaxID: 1136534
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-58
D2
medium
residues 205-299
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.75 | 30.0 | 4.71e-01 | 77.9% | 100.0% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 39.0 | 4.82e-01 | 82.1% | 94.6% |
| 2wxfA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 45.0 | 4.26e-01 | 85.3% | 84.0% |
| 2kmcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 44.0 | 4.34e-01 | 82.1% | 86.3% |
| 4bfrB02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 48.0 | 4.38e-01 | 92.6% | 78.1% |
| 4a55A01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 48.0 | 3.38e-01 | 92.6% | 38.1% |
| 2y3aA01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 46.0 | 3.37e-01 | 93.7% | 36.4% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 44.0 | 4.33e-01 | 88.4% | 87.5% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 35.0 | 3.95e-01 | 71.6% | 92.3% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.55 | 41.0 | 4.10e-01 | 77.9% | 88.4% |
| 1t0yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 39.0 | 4.05e-01 | 76.8% | 94.4% |
| 3ig3A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 39.0 | 3.73e-01 | 76.8% | 91.1% |
| 2c7hA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 42.0 | 4.41e-01 | 86.3% | 100.0% |
| 2z8lA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 38.0 | 3.63e-01 | 76.8% | 88.0% |
| 4d2kB00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 39.0 | 4.19e-01 | 78.9% | 95.0% |
| 1wx8A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 42.0 | 4.23e-01 | 89.5% | 87.5% |
| 1e7uA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 43.0 | 3.64e-01 | 91.6% | 56.3% |
| 4efoA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 40.0 | 4.14e-01 | 84.2% | 96.6% |
| 1v86A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.81e-01 | 80.0% | 83.2% |
| 1e94A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 36.0 | 3.04e-01 | 74.7% | 79.9% |
| 2jxxA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 37.0 | 3.95e-01 | 78.9% | 100.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004151 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 38.0 | 4.90e-01 | 76.8% | 100.0% |
| 4956278 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 38.0 | 4.96e-01 | 80.0% | 100.0% |
| 3846875 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.64 | 42.0 | 4.96e-01 | 94.7% | 98.5% |
| 3226771 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 42.0 | 4.54e-01 | 70.5% | 98.8% |
| 3438878 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 48.0 | 4.29e-01 | 84.2% | 96.2% |
| 2753431 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 44.0 | 4.55e-01 | 77.9% | 98.9% |
| 3624737 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.60 | 41.0 | 4.39e-01 | 71.6% | 98.8% |
| 3338279 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 44.0 | 3.51e-01 | 80.0% | 57.0% |
| 4864058 | 4987.1.1.1 ↗ | few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal_L31 | 0.59 | 31.0 | 3.73e-01 | 74.7% | 77.0% |
| 3612584 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 45.0 | 4.37e-01 | 83.2% | 90.0% |
| 3574660 | 207.1.1.372 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Ubiquitin_2 | 0.58 | 41.0 | 2.80e-01 | 74.7% | 40.5% |
| 3499892 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.58 | 29.0 | 3.39e-01 | 77.9% | 67.7% |
| 3384326 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 41.0 | 4.42e-01 | 77.9% | 88.7% |
| 3851015 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.58 | 46.0 | 3.63e-01 | 86.3% | 52.5% |
| 3394277 | 221.1.1.168 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B | 0.58 | 49.0 | 3.52e-01 | 93.7% | 37.9% |
| 3534015 | 221.1.1.168 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B | 0.57 | 48.0 | 3.44e-01 | 93.7% | 36.0% |
| 4027599 | 221.17.1.2 ↗ | a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › BCD1 | 0.57 | 46.0 | 4.17e-01 | 88.4% | 85.2% |
| 3506970 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.57 | 41.0 | 4.33e-01 | 75.8% | 100.0% |
| 3197309 | 376.1.4.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › PF26200 | 0.57 | 34.0 | 3.27e-01 | 88.4% | 50.0% |
| 3633967 | 376.1.6.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › PF26200 | 0.56 | 35.0 | 3.65e-01 | 91.6% | 68.2% |
| 3781796 | 221.1.1.40 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TUG-UBL1 | 0.55 | 40.0 | 4.15e-01 | 77.9% | 91.1% |
| 4061290 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.55 | 38.0 | 4.27e-01 | 74.7% | 94.5% |
| 3399206 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 39.0 | 4.18e-01 | 75.8% | 98.8% |
| 3253403 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.55 | 44.0 | 3.70e-01 | 89.5% | 60.0% |
| 3646736 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 39.0 | 4.09e-01 | 90.5% | 84.7% |
| 3555707 | 221.1.1.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N | 0.54 | 41.0 | 4.29e-01 | 82.1% | 90.6% |
| 3457951 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.54 | 40.0 | 4.11e-01 | 78.9% | 87.8% |
| 3368300 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.54 | 45.0 | 4.17e-01 | 90.5% | 95.8% |
| 3254286 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.54 | 37.0 | 3.88e-01 | 72.6% | 87.5% |
| 3893131 | 221.17.1.2 ↗ | a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › BCD1 | 0.54 | 45.0 | 3.92e-01 | 93.7% | 96.7% |
| 5067674 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 42.0 | 4.26e-01 | 85.3% | 88.4% |
| 3735773 | 221.1.1.95 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Dsc3_N | 0.53 | 39.0 | 3.77e-01 | 81.1% | 73.9% |
| 3956586 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.53 | 38.0 | 2.91e-01 | 76.8% | 47.1% |
| 3790710 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.53 | 44.0 | 3.01e-01 | 92.6% | 48.9% |
| 3877295 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.53 | 38.0 | 3.97e-01 | 75.8% | 91.8% |
| 3297742 | 221.17.1.2 ↗ | a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › BCD1 | 0.53 | 43.0 | 3.82e-01 | 92.6% | 95.2% |
| 3273348 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 37.0 | 2.17e-01 | 73.7% | 8.4% |
| 4442639 | 221.1.1.88 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CLU_N | 0.52 | 40.0 | 3.82e-01 | 83.2% | 74.8% |
| 4959950 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.52 | 39.0 | 4.06e-01 | 80.0% | 90.6% |
| 3932279 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 41.0 | 4.06e-01 | 88.4% | 88.6% |
| 3594463 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.52 | 42.0 | 3.29e-01 | 88.4% | 81.0% |
| 3833608 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.52 | 40.0 | 3.65e-01 | 84.2% | 61.5% |
| 3814682 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.51 | 39.0 | 3.88e-01 | 82.1% | 82.0% |
| 3505430 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.74e-01 | 89.5% | 79.2% |
| 3276469 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.51 | 39.0 | 4.05e-01 | 90.5% | 90.0% |
| 3833546 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 39.0 | 4.04e-01 | 84.2% | 92.2% |
| 3862546 | 221.1.1.77 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH_UBL1 | 0.50 | 39.0 | 3.99e-01 | 87.4% | 92.6% |
| 3244352 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 42.0 | 4.24e-01 | 93.7% | 94.7% |
| 3266011 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.50 | 39.0 | 4.14e-01 | 100.0% | 100.0% |