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JN712910.1__AEZ50520.1__BCD7_0073__00073
Bact-VirJN712910.1__AEZ50520.1__BCD7_0073__00073
Identity
- Accession:
- JN712910 ↗
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Taxonomy
TaxID: 1136534
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-88
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nqpA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 41.0 | 2.62e-01 | 85.7% | 13.6% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 48.0 | 3.82e-01 | 100.0% | 80.4% |
| 3lltA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 41.0 | 2.91e-01 | 79.8% | 50.4% |
| 1akoA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 41.0 | 2.93e-01 | 82.1% | 89.6% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 38.0 | 3.84e-01 | 91.7% | 73.3% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.53 | 45.0 | 3.36e-01 | 97.6% | 84.1% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 33.0 | 3.55e-01 | 91.7% | 76.5% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 37.0 | 3.70e-01 | 91.7% | 72.9% |
| 1apyB00 | 3.60.20.30 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › (Glycosyl)asparaginase | 0.52 | 45.0 | 3.82e-01 | 98.8% | 85.1% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 44.0 | 3.25e-01 | 96.4% | 71.4% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 43.0 | 2.90e-01 | 100.0% | 86.2% |
| 3pz8C00 | 2.40.240.130 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.51 | 37.0 | 3.82e-01 | 81.0% | 92.6% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 40.0 | 3.81e-01 | 86.9% | 77.0% |
| 5ktaA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 3.37e-01 | 95.2% | 53.4% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 29.0 | 3.40e-01 | 82.1% | 84.2% |
| 4ydzA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 43.0 | 3.77e-01 | 100.0% | 74.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3365319 | 3012.1.1.11 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PF27677 | 0.62 | 47.0 | 4.77e-01 | 81.0% | 100.0% |
| 4984657 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.59 | 36.0 | 3.67e-01 | 78.6% | 60.0% |
| 3169674 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.59 | 42.0 | 3.02e-01 | 75.0% | 80.4% |
| 3724091 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.57 | 42.0 | 2.97e-01 | 78.6% | 78.4% |
| 3969531 | 7581.1.1.0 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like | 0.56 | 40.0 | 2.66e-01 | 78.6% | 28.2% |
| 4999586 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.55 | 47.0 | 3.90e-01 | 96.4% | 86.5% |
| 4476444 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.54 | 34.0 | 3.95e-01 | 72.6% | 98.2% |
| 4019993 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.54 | 45.0 | 3.22e-01 | 95.2% | 60.0% |
| 5037841 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.53 | 39.0 | 3.48e-01 | 76.2% | 98.3% |
| 4981961 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.53 | 43.0 | 3.55e-01 | 91.7% | 60.0% |
| 4313724 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.52 | 39.0 | 2.96e-01 | 81.0% | 58.6% |
| 3690788 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.52 | 43.0 | 3.14e-01 | 96.4% | 71.5% |
| 1503850 | 617.1.1.2 ↗ | alpha bundles › A virus capsid protein alpha-helical domain › A virus capsid protein alpha-helical domain › A virus capsid protein alpha-helical domain › Rota_Capsid_VP6 | 0.52 | 33.0 | 2.75e-01 | 72.6% | 35.8% |
| 3195871 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.52 | 43.0 | 2.58e-01 | 96.4% | 60.4% |
| 3682574 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.51 | 44.0 | 3.11e-01 | 100.0% | 83.3% |
| 3408112 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 39.0 | 2.70e-01 | 84.5% | 53.8% |
| 3821886 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 31.0 | 3.26e-01 | 75.0% | 65.3% |
| None | — | 0.51 | 43.0 | 3.15e-01 | 97.6% | 86.0% | |
| 3632684 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.51 | 39.0 | 2.52e-01 | 86.9% | 21.5% |
| 4440911 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 44.0 | 3.01e-01 | 100.0% | 86.2% |
| 4949189 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.50 | 34.0 | 3.72e-01 | 70.2% | 91.3% |
| 3467968 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.50 | 31.0 | 3.44e-01 | 75.0% | 80.0% |
| 5051542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 40.0 | 3.20e-01 | 91.7% | 82.1% |
| 3425274 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 41.0 | 3.44e-01 | 92.9% | 79.4% |