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JN712910.1__AEZ50528.1__BCD7_0081__00081
Bact-VirJN712910.1__AEZ50528.1__BCD7_0081__00081
Identity
- Accession:
- JN712910 ↗
- Kingdom:
- phage
Quality
55.6
mean pLDDT
Taxonomy
TaxID: 1136534
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-52
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.66 | 42.0 | 4.50e-01 | 100.0% | 75.6% |
| 2bnkA00 | 1.10.8.600 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like | 0.64 | 49.0 | 4.63e-01 | 96.2% | 68.8% |
| 1qhbA00 | 1.10.606.10 | Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 | 0.60 | 47.0 | 2.69e-01 | 92.3% | 92.1% |
| 4w88B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 41.0 | 2.57e-01 | 80.8% | 11.8% |
| 1exzB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 44.0 | 3.27e-01 | 86.5% | 31.4% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 35.0 | 2.96e-01 | 76.9% | 33.7% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 41.0 | 3.91e-01 | 90.4% | 69.2% |
| 1y74A00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.51 | 41.0 | 4.05e-01 | 98.1% | 94.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3705583 | 3928.1.1.0 ↗ | alpha bundles › Cell division protein CrgA › Cell division protein CrgA › Cell division protein CrgA | 0.64 | 49.0 | 4.62e-01 | 92.3% | 88.6% |
| 4386560 | 189.1.1.1 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RasGAP | 0.63 | 52.0 | 3.09e-01 | 100.0% | 12.1% |
| 4232718 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.61 | 54.0 | 4.36e-01 | 100.0% | 57.0% |
| 3499828 | 3226.1.1.3 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › HCO3_cotransp | 0.61 | 50.0 | 2.88e-01 | 94.2% | 10.4% |
| 3525714 | 101.1.1.286 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF27813 | 0.60 | 47.0 | 3.96e-01 | 94.2% | 98.0% |
| 55264 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.57 | 40.0 | 4.15e-01 | 80.8% | 87.2% |
| 3179924 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.56 | 35.0 | 3.24e-01 | 92.3% | 47.1% |
D2
medium
residues 71-183_196-202
D3
medium
residues 306-359