←Back to structures

JN712910.1__AEZ50532.1__BCD7_0085__00085

Bact-Vir

JN712910.1__AEZ50532.1__BCD7_0085__00085

Identity

Accession:
JN712910 ↗
Kingdom:
phage

Quality

60.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Becedseptimavirus› Bacillus_phage_BCD7

TaxID: 1136534

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 105-163
PDB
Domain cluster: rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.89 65.0 7.30e-01 93.2% 97.8%
4b8vA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.86 67.0 6.45e-01 100.0% 73.1%
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.81 62.0 5.78e-01 98.3% 67.1%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.76 55.0 5.82e-01 96.6% 92.0%
2djpA00 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.75 57.0 5.26e-01 100.0% 63.6%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.74 55.0 5.84e-01 100.0% 95.9%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 59.0 5.12e-01 100.0% 64.8%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.59 44.0 4.08e-01 83.1% 73.4%
3sluB01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.40e-01 100.0% 62.6%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.86e-01 88.1% 86.7%
6n9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.66e-01 91.5% 91.0%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.91e-01 96.6% 90.2%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 43.0 3.78e-01 100.0% 73.7%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 43.0 3.67e-01 100.0% 67.3%
4iiwA01 3.30.1490.480 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase 0.51 39.0 3.67e-01 98.3% 69.7%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4448562 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 63.0 6.56e-01 91.5% 78.2%
4177991 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 74.0 7.64e-01 100.0% 92.7%
3452845 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 68.0 7.03e-01 98.3% 85.5%
3955076 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 65.0 7.36e-01 88.1% 100.0%
4249176 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.90 69.0 6.91e-01 100.0% 80.0%
3165071 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.89 68.0 7.07e-01 100.0% 87.3%
5004560 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 73.0 7.56e-01 100.0% 94.5%
4157099 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 68.0 7.42e-01 98.3% 100.0%
4205026 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.88 67.0 6.47e-01 98.3% 72.3%
3587382 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 72.0 7.43e-01 100.0% 94.5%
4680476 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 68.0 6.40e-01 100.0% 70.0%
3898121 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 66.0 6.81e-01 98.3% 85.5%
3974521 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.87 67.0 6.66e-01 100.0% 80.0%
3349612 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.87 64.0 6.87e-01 98.3% 92.0%
2124476 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.86 67.0 5.03e-01 100.0% 36.3%
3969916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 69.0 6.48e-01 100.0% 72.9%
4277578 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 65.0 6.96e-01 98.3% 96.0%
2124917 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 65.0 4.66e-01 100.0% 30.4%
3985839 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 66.0 6.18e-01 98.3% 70.0%
3417561 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 69.0 4.28e-01 100.0% 17.6%
3670445 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 69.0 4.23e-01 100.0% 16.8%
3165082 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.84 63.0 6.75e-01 94.9% 94.0%
2809236 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 71.0 6.99e-01 100.0% 87.1%
1758716 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.83 63.0 6.67e-01 98.3% 92.3%
None — 0.83 68.0 5.21e-01 100.0% 41.6%
3320955 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.82 64.0 6.18e-01 100.0% 75.4%
1178373 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 61.0 6.04e-01 96.6% 74.6%
3981327 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 67.0 7.04e-01 100.0% 96.3%
3979943 101.15.1.3 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X 0.82 64.0 6.91e-01 94.9% 100.0%
3381619 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 67.0 4.16e-01 100.0% 17.7%
4149501 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 62.0 6.69e-01 98.3% 96.0%
4491522 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.82 62.0 6.20e-01 98.3% 80.0%
3337328 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.81 68.0 4.25e-01 100.0% 18.7%
3359799 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.81 66.0 5.01e-01 100.0% 39.1%
3711427 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 60.0 5.69e-01 100.0% 68.1%
3691772 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 62.0 6.37e-01 100.0% 89.1%
3604763 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.80 59.0 5.22e-01 100.0% 55.3%
3654876 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 68.0 5.12e-01 100.0% 40.7%
2895417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.79 64.0 5.84e-01 98.3% 67.5%
1759182 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 60.0 6.39e-01 100.0% 96.1%
3234671 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 59.0 6.07e-01 96.6% 85.5%
3190144 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 59.0 6.35e-01 98.3% 98.0%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.79 62.0 6.45e-01 98.3% 94.3%
3656643 101.15.1.9 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.79 65.0 4.89e-01 100.0% 39.3%
3989756 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 59.0 6.30e-01 93.2% 100.0%
3448128 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.78 67.0 5.04e-01 100.0% 40.7%
4995817 101.15.1.4 ↗ alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 0.78 69.0 6.51e-01 100.0% 81.4%
3636424 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 61.0 6.28e-01 98.3% 90.9%
4492966 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 59.0 6.05e-01 98.3% 87.3%
3365578 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.77 65.0 5.87e-01 100.0% 68.8%
3720958 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 59.0 6.24e-01 100.0% 98.0%
4022922 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 58.0 5.97e-01 98.3% 87.3%
4128043 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.76 54.0 5.94e-01 93.2% 100.0%
3651054 101.15.1.10 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP 0.75 61.0 4.44e-01 100.0% 33.5%
3973526 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.74 67.0 5.67e-01 100.0% 65.3%
4483829 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 65.0 6.35e-01 98.3% 89.2%
3191020 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 59.0 5.93e-01 98.3% 86.7%
2042916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 56.0 5.76e-01 100.0% 90.7%
3819870 101.15.1.6 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 0.73 65.0 4.94e-01 100.0% 48.9%
3185732 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.72 59.0 6.10e-01 98.3% 98.2%
3963519 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.71 62.0 6.04e-01 100.0% 87.7%
1649977 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.67 59.0 5.08e-01 100.0% 63.3%
3276188 221.1.2.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.62 53.0 5.20e-01 100.0% 98.4%
2876157 101.1.9.105 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.61 46.0 4.74e-01 84.7% 100.0%
4092544 102.2.1.4 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.60 50.0 4.35e-01 100.0% 68.0%
4974775 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.58 43.0 4.32e-01 83.1% 86.7%
3976015 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 40.0 3.77e-01 86.4% 72.5%
3473450 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.53 40.0 3.31e-01 86.4% 94.2%
5035522 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 40.0 3.51e-01 91.5% 71.4%
D2 medium residues 29-85
PDB