←Back to structures
JN712910.1__AEZ50541.1__BCD7_0094__00094
Bact-VirJN712910.1__AEZ50541.1__BCD7_0094__00094
Identity
- Accession:
- JN712910 ↗
- Kingdom:
- phage
Quality
94.5
mean pLDDT
Taxonomy
TaxID: 1136534
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
rep: HM114277.1__AEQ21013.1__E3_0990__00104__D3-70
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 53.0 | 4.47e-01 | 100.0% | 51.5% |
| 1qwrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 48.0 | 4.28e-01 | 100.0% | 55.1% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 51.0 | 4.01e-01 | 100.0% | 41.3% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 51.0 | 4.44e-01 | 100.0% | 58.0% |
| 1jb0D00 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.63 | 51.0 | 4.02e-01 | 100.0% | 40.6% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.62 | 52.0 | 4.47e-01 | 100.0% | 80.2% |
| 3eo6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 48.0 | 4.03e-01 | 98.2% | 48.1% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 34.0 | 2.82e-01 | 89.1% | 31.0% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 45.0 | 3.87e-01 | 100.0% | 49.0% |
| 2f4pA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 46.0 | 3.67e-01 | 100.0% | 39.6% |
| 2zuoA09 | 2.30.30.570 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 4.42e-01 | 90.9% | 93.7% |
| 7trwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 50.0 | 4.15e-01 | 100.0% | 97.0% |
| 4b29A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 48.0 | 3.36e-01 | 98.2% | 36.9% |
| 3t2lA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 47.0 | 3.53e-01 | 94.5% | 85.6% |
| 5cu1A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 47.0 | 3.33e-01 | 98.2% | 37.1% |
| 7wdtA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 46.0 | 3.49e-01 | 100.0% | 48.7% |
| 1nz8A00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.55 | 44.0 | 3.62e-01 | 98.2% | 84.0% |
| 2xhcA01 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.54 | 43.0 | 3.81e-01 | 100.0% | 75.8% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.53 | 40.0 | 2.69e-01 | 83.6% | 92.2% |
| 1bquA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.73e-01 | 100.0% | 83.0% |
| 5eo9B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.43e-01 | 98.2% | 50.5% |
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 38.0 | 3.53e-01 | 80.0% | 76.0% |
| 1l5xA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.51 | 39.0 | 2.57e-01 | 85.5% | 85.5% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 38.0 | 3.27e-01 | 85.5% | 68.4% |
| 2mngA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 3.28e-01 | 100.0% | 42.7% |
| 3vovA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 38.0 | 2.93e-01 | 89.1% | 80.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3977412 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.83 | 68.0 | 7.11e-01 | 96.4% | 100.0% |
| 3929096 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.79 | 61.0 | 6.34e-01 | 96.4% | 94.0% |
| 3742088 | 4076.3.1.3 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C | 0.75 | 59.0 | 6.01e-01 | 96.4% | 88.9% |
| 4932084 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.74 | 58.0 | 6.01e-01 | 100.0% | 98.0% |
| 5069341 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.73 | 56.0 | 5.79e-01 | 96.4% | 94.0% |
| 4006496 | 10.12.1.116 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30441 | 0.70 | 53.0 | 4.08e-01 | 100.0% | 34.8% |
| 4230268 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.69 | 51.0 | 5.40e-01 | 92.7% | 97.8% |
| 3991044 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.67 | 58.0 | 4.63e-01 | 100.0% | 93.9% |
| 4982789 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.67 | 49.0 | 4.75e-01 | 94.5% | 69.2% |
| 4994655 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.65 | 50.0 | 5.13e-01 | 96.4% | 96.0% |
| 3600564 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 56.0 | 5.22e-01 | 100.0% | 84.3% |
| 4649321 | 865.1.1.1 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 | 0.64 | 53.0 | 3.77e-01 | 100.0% | 86.0% |
| 4031645 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.63 | 48.0 | 4.96e-01 | 98.2% | 98.0% |
| 3972519 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.62 | 48.0 | 3.95e-01 | 100.0% | 43.5% |
| 3408327 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 35.0 | 3.00e-01 | 89.1% | 34.4% |
| 2391024 | 10.12.1.33 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth | 0.60 | 46.0 | 3.63e-01 | 100.0% | 37.0% |
| 4432988 | 865.1.1.1 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 | 0.59 | 48.0 | 3.40e-01 | 100.0% | 83.3% |
| 5069324 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 47.0 | 3.69e-01 | 100.0% | 68.1% |
| 4979124 | 821.1.1.4 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF123 | 0.56 | 46.0 | 3.46e-01 | 100.0% | 47.1% |
| 3918340 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 43.0 | 4.10e-01 | 96.4% | 82.9% |
| 5037411 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.53 | 42.0 | 3.59e-01 | 94.5% | 93.0% |
| 3779679 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 39.0 | 2.55e-01 | 100.0% | 15.2% |
| 10482 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.51 | 39.0 | 2.60e-01 | 87.3% | 85.5% |