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JN882285.1__AFC21701.1__GAP32_251__00254
Bact-VirJN882285.1__AFC21701.1__GAP32_251__00254
Identity
- Accession:
- JN882285 ↗
- Kingdom:
- phage
Quality
72.8
mean pLDDT
Taxonomy
TaxID: 1141136
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-76
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 59.0 | 5.06e-01 | 95.7% | 73.6% |
| 3dgpA00 | 3.30.70.2610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 48.0 | 5.05e-01 | 90.0% | 88.7% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.65 | 47.0 | 3.64e-01 | 75.7% | 90.8% |
| 2v4jA02 | 3.30.70.2500 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 54.0 | 4.83e-01 | 100.0% | 83.2% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.61 | 41.0 | 4.26e-01 | 94.3% | 75.4% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.60 | 36.0 | 3.46e-01 | 74.3% | 50.0% |
| 1d2zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 41.0 | 3.72e-01 | 82.9% | 84.3% |
| 6bz0D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 39.0 | 2.76e-01 | 78.6% | 91.2% |
| 4ivfA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 36.0 | 3.11e-01 | 72.9% | 73.3% |
| 3j27B00 | 1.10.8.970 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Flavivirus envelope glycoprotein M-like | 0.52 | 33.0 | 3.33e-01 | 82.9% | 61.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4128792 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.63 | 54.0 | 5.21e-01 | 94.3% | 88.7% |
| 4373134 | 304.160.1.1 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF | 0.63 | 53.0 | 4.84e-01 | 94.3% | 77.9% |
| 3974068 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.60 | 32.0 | 3.24e-01 | 71.4% | 49.3% |
| 3997320 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.58 | 36.0 | 3.47e-01 | 75.7% | 53.8% |
| 5006023 | 3456.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › Oxidored_q4 | 0.58 | 40.0 | 3.40e-01 | 74.3% | 44.3% |
| 3196140 | 223.2.1.42 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Synaptobrevin | 0.56 | 50.0 | 3.51e-01 | 100.0% | 65.3% |
| 4970643 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.52 | 39.0 | 3.53e-01 | 84.3% | 58.0% |