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JN882285.1__AFC21889.1__GAP32_435__00442
Bact-VirJN882285.1__AFC21889.1__GAP32_435__00442
Identity
- Accession:
- JN882285 ↗
- Kingdom:
- phage
Quality
64.9
mean pLDDT
Taxonomy
TaxID: 1141136
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-130
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.65 | 43.0 | 4.40e-01 | 89.1% | 68.5% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.63 | 57.0 | 4.38e-01 | 100.0% | 74.3% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.62 | 38.0 | 4.00e-01 | 89.1% | 67.5% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.62 | 49.0 | 3.61e-01 | 85.9% | 60.8% |
| 1imvA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.61 | 42.0 | 3.46e-01 | 71.7% | 66.9% |
| 2oayA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.61 | 42.0 | 3.37e-01 | 71.7% | 75.0% |
| 3nctA00 | 3.40.50.11880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein | 0.60 | 47.0 | 4.06e-01 | 82.6% | 71.5% |
| 3ozqA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 41.0 | 3.39e-01 | 71.7% | 56.4% |
| 3iujA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.59 | 49.0 | 3.36e-01 | 90.2% | 48.2% |
| 7zgmA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 40.0 | 2.93e-01 | 71.7% | 60.7% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.57 | 43.0 | 4.60e-01 | 89.1% | 93.7% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 46.0 | 3.99e-01 | 89.1% | 73.3% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.56 | 47.0 | 4.14e-01 | 92.4% | 71.4% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.56 | 44.0 | 4.04e-01 | 83.7% | 91.7% |
| 2r9yA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 39.0 | 3.33e-01 | 71.7% | 73.3% |
| 2uvaG08 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 39.0 | 2.79e-01 | 73.9% | 67.9% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 49.0 | 3.37e-01 | 100.0% | 80.3% |
| 5swiD01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 42.0 | 3.21e-01 | 84.8% | 84.4% |
| 3v0rA01 | 2.40.350.20 | Mainly Beta › Beta Barrel › AOC barrel-like › | 0.54 | 42.0 | 3.86e-01 | 85.9% | 63.3% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 42.0 | 3.49e-01 | 84.8% | 97.0% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.54 | 39.0 | 3.44e-01 | 83.7% | 50.7% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.54 | 41.0 | 3.65e-01 | 82.6% | 100.0% |
| 1mufA01 | 2.20.110.10 | Mainly Beta › Single Sheet › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0.54 | 43.0 | 4.08e-01 | 88.0% | 77.9% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.74e-01 | 92.4% | 86.4% |
| 2qwzA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 45.0 | 3.93e-01 | 90.2% | 85.7% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.19e-01 | 84.8% | 74.2% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 4.35e-01 | 92.4% | 89.9% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.53 | 42.0 | 3.34e-01 | 89.1% | 43.5% |
| 1o7dD01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.53 | 38.0 | 2.79e-01 | 76.1% | 71.3% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.52 | 45.0 | 3.22e-01 | 98.9% | 79.0% |
| 3f1tB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 46.0 | 4.01e-01 | 94.6% | 84.6% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 44.0 | 4.04e-01 | 91.3% | 85.4% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 46.0 | 3.14e-01 | 96.7% | 83.1% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 43.0 | 3.49e-01 | 92.4% | 52.4% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.52 | 45.0 | 3.17e-01 | 98.9% | 78.8% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 44.0 | 3.07e-01 | 100.0% | 92.4% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.51 | 39.0 | 3.00e-01 | 82.6% | 94.8% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.81e-01 | 95.7% | 74.6% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.51 | 39.0 | 3.23e-01 | 83.7% | 95.5% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 36.0 | 3.59e-01 | 84.8% | 71.6% |
| 3lf7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 44.0 | 2.93e-01 | 100.0% | 81.0% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 43.0 | 3.08e-01 | 96.7% | 80.7% |
| 2ovsA00 | 2.40.128.380 | Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR | 0.50 | 43.0 | 3.95e-01 | 95.7% | 72.9% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4135015 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.68 | 40.0 | 4.08e-01 | 88.0% | 58.9% |
| 3733265 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.67 | 58.0 | 5.53e-01 | 92.4% | 97.1% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.67 | 51.0 | 4.69e-01 | 89.1% | 62.5% |
| 3441531 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.66 | 47.0 | 3.27e-01 | 75.0% | 37.3% |
| 3929502 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 44.0 | 4.39e-01 | 79.3% | 67.0% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.64 | 50.0 | 4.72e-01 | 92.4% | 69.1% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.64 | 49.0 | 5.14e-01 | 84.8% | 88.1% |
| 3254588 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.62 | 50.0 | 3.33e-01 | 87.0% | 26.8% |
| 4001272 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.62 | 43.0 | 2.68e-01 | 89.1% | 13.7% |
| 3781478 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.61 | 46.0 | 4.41e-01 | 93.5% | 69.5% |
| 3812869 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.61 | 54.0 | 5.30e-01 | 98.9% | 100.0% |
| 4937746 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.60 | 48.0 | 4.49e-01 | 85.9% | 79.1% |
| 3545608 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.60 | 49.0 | 3.23e-01 | 88.0% | 32.0% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.60 | 50.0 | 4.85e-01 | 94.6% | 98.1% |
| 5036626 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 48.0 | 3.11e-01 | 87.0% | 29.0% |
| 4560456 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.59 | 49.0 | 4.26e-01 | 90.2% | 72.1% |
| 3802306 | 284.1.2.0 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases | 0.59 | 50.0 | 5.02e-01 | 95.7% | 100.0% |
| 139092 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.59 | 46.0 | 3.07e-01 | 84.8% | 47.1% |
| 3946943 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.58 | 48.0 | 3.53e-01 | 89.1% | 66.9% |
| 3418904 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 49.0 | 4.85e-01 | 96.7% | 100.0% |
| 4012616 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.57 | 49.0 | 4.64e-01 | 97.8% | 98.3% |
| 3519898 | 5.1.4.262 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 | 0.57 | 48.0 | 3.46e-01 | 92.4% | 77.2% |
| 3295575 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.57 | 47.0 | 4.61e-01 | 92.4% | 88.0% |
| 3427945 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.57 | 48.0 | 4.77e-01 | 96.7% | 100.0% |
| 3620679 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 40.0 | 3.16e-01 | 72.8% | 41.6% |
| 4001579 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 46.0 | 4.26e-01 | 88.0% | 98.3% |
| 3724380 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 43.0 | 4.26e-01 | 92.4% | 78.9% |
| 3173290 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 47.0 | 3.16e-01 | 95.7% | 71.5% |
| 3809666 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 46.0 | 2.73e-01 | 92.4% | 28.0% |
| 3936785 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 41.0 | 3.93e-01 | 91.3% | 68.6% |
| 3266673 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 42.0 | 2.92e-01 | 83.7% | 40.0% |
| 3374672 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 46.0 | 3.06e-01 | 92.4% | 59.4% |
| 3934802 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.55 | 40.0 | 4.03e-01 | 78.3% | 88.4% |
| 3303573 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 46.0 | 3.08e-01 | 92.4% | 58.6% |
| 3906313 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 48.0 | 3.24e-01 | 100.0% | 77.3% |
| 185584 | 3385.1.1.1 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › AltA1 | 0.54 | 42.0 | 3.76e-01 | 85.9% | 58.5% |
| 5079117 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.30e-01 | 94.6% | 79.3% |
| 4927548 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.54 | 45.0 | 4.15e-01 | 91.3% | 83.3% |
| 3391001 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 46.0 | 3.45e-01 | 92.4% | 91.8% |
| 3661138 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.54 | 42.0 | 3.70e-01 | 84.8% | 82.9% |
| 3972685 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 45.0 | 3.88e-01 | 94.6% | 70.7% |
| 5018044 | 5.1.3.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 | 0.53 | 47.0 | 3.24e-01 | 100.0% | 82.1% |
| 3962288 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 42.0 | 3.76e-01 | 94.6% | 60.8% |
| 5047766 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 39.0 | 3.65e-01 | 78.3% | 75.7% |
| 3707052 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 45.0 | 2.85e-01 | 94.6% | 69.7% |
| 3907198 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 44.0 | 3.42e-01 | 92.4% | 94.1% |
| 4094199 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 47.0 | 3.23e-01 | 100.0% | 72.4% |
| 3891004 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.52 | 43.0 | 4.29e-01 | 90.2% | 91.6% |
| 3217673 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 47.0 | 4.49e-01 | 100.0% | 90.5% |
| 3277839 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 44.0 | 3.85e-01 | 98.9% | 77.3% |
| 3706423 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 2.97e-01 | 96.7% | 42.3% |
| 3990338 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 3.25e-01 | 100.0% | 78.2% |
| 396301 | 77.2.1.2 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › SET7_N | 0.51 | 36.0 | 3.70e-01 | 91.3% | 80.0% |
| 3941583 | 331.3.1.26 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2867 | 0.50 | 40.0 | 3.44e-01 | 94.6% | 52.7% |