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JN882285.1__AFC21944.1__GAP32_486__00497
Bact-VirJN882285.1__AFC21944.1__GAP32_486__00497
Identity
- Accession:
- JN882285 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
TaxID: 1141136
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-68
Domain cluster:
rep: NC_070778.1__YP_010650701.1__PP425_gp291__00161__D2-67
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uzgA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 66.0 | 5.12e-01 | 100.0% | 47.9% |
| 3q7yA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.68 | 56.0 | 4.46e-01 | 94.8% | 100.0% |
| 2vxtI00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 53.0 | 3.98e-01 | 96.6% | 95.5% |
| 3a07B00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.63 | 51.0 | 4.14e-01 | 93.1% | 96.6% |
| 1jb0D00 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.61 | 54.0 | 4.10e-01 | 100.0% | 47.8% |
| 4oq1A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.77e-01 | 100.0% | 50.5% |
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.41e-01 | 79.3% | 77.9% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 42.0 | 3.83e-01 | 100.0% | 95.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3299832 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.74 | 64.0 | 4.79e-01 | 98.3% | 93.8% |
| 3596285 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 51.0 | 3.77e-01 | 100.0% | 54.7% |
| 5059065 | 11.1.1.1410 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg | 0.54 | 37.0 | 3.35e-01 | 100.0% | 49.4% |
| 3918218 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.35e-01 | 100.0% | 47.4% |