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AFA44813.1

Arc-Vir

JQ010983__AFA44813.1__X__00001

Identity

Accession:
JQ010983 ↗
Protein ID:
AFA44813.1 ↗
Kingdom:
archaea

Quality

67.9 mean pLDDT

Taxonomy

TaxID: 1115696

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 54-164_183-200
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.85e-01 79.8% 90.0%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 51.0 5.81e-01 77.5% 90.8%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 44.0 5.55e-01 70.5% 97.4%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 46.0 5.43e-01 72.1% 92.0%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 49.0 5.44e-01 80.6% 85.3%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 5.65e-01 77.5% 96.7%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 53.0 5.40e-01 76.7% 94.5%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 48.0 5.39e-01 77.5% 87.3%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 5.39e-01 76.0% 95.3%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 5.48e-01 71.3% 92.7%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 47.0 5.08e-01 74.4% 77.7%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 5.14e-01 72.9% 82.9%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.03e-01 86.0% 66.9%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 5.51e-01 75.2% 93.4%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 45.0 5.39e-01 72.1% 98.8%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 4.58e-01 83.7% 57.7%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.89e-01 82.9% 71.2%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 4.78e-01 80.6% 67.4%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 5.11e-01 86.0% 75.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 45.0 4.88e-01 72.9% 82.9%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.16e-01 86.0% 77.4%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.98e-01 86.0% 70.7%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.01e-01 86.0% 75.4%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.77e-01 82.9% 72.0%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.07e-01 86.0% 75.2%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.75e-01 83.7% 70.6%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.86e-01 86.0% 74.1%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.72e-01 86.0% 68.0%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.62e-01 86.0% 67.8%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.80e-01 75.2% 90.4%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.64 26.0 3.53e-01 83.7% 69.9%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.60e-01 82.9% 74.6%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.80e-01 86.0% 75.4%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 5.23e-01 86.0% 94.3%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.65e-01 86.0% 69.9%
3gr5A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 28.0 3.76e-01 86.0% 80.9%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.68e-01 86.0% 79.1%
4g08A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 27.0 3.64e-01 86.0% 78.6%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.59 27.0 3.41e-01 82.9% 70.1%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.79e-01 86.0% 86.6%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 25.0 3.21e-01 82.9% 67.1%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.57 25.0 3.27e-01 86.0% 72.5%
1s7hA01 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 26.0 3.33e-01 98.4% 75.0%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5013990 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 68.0 7.10e-01 86.0% 90.0%
5040897 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.79 46.0 5.93e-01 72.1% 100.0%
4940464 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.79 55.0 5.96e-01 77.5% 83.6%
5013440 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 61.0 5.91e-01 98.4% 75.0%
4996058 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 49.0 5.16e-01 76.0% 71.3%
5036720 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 49.0 5.90e-01 71.3% 98.8%
3759099 7558.1.1.10 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C 0.76 61.0 4.49e-01 82.9% 80.1%
4938723 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 50.0 4.99e-01 78.3% 65.4%
4029108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 50.0 5.38e-01 76.0% 78.9%
4953964 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 53.0 5.71e-01 72.1% 85.5%
4543264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 55.0 5.05e-01 76.0% 63.6%
4943350 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 50.0 5.66e-01 76.0% 88.9%
3594005 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 4.72e-01 73.6% 55.2%
4926786 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 45.0 5.53e-01 73.6% 96.2%
3721121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 49.0 5.49e-01 75.2% 86.0%
4958040 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.74 52.0 5.95e-01 74.4% 96.8%
4370980 101.1.2.637 alpha arrays › HTH › HTH › winged helix domain › DUF3375 0.74 52.0 5.62e-01 72.9% 91.8%
5000349 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 53.0 5.55e-01 75.2% 83.3%
4974161 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 53.0 5.42e-01 74.4% 81.5%
5033276 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 50.0 4.72e-01 87.6% 58.9%
4992272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 50.0 5.18e-01 76.0% 75.0%
4980177 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.73 46.0 4.83e-01 81.4% 69.2%
3942501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 50.0 5.80e-01 72.1% 100.0%
5026783 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 51.0 5.75e-01 72.9% 96.0%
3960773 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.72 47.0 4.05e-01 76.0% 42.0%
3604748 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 50.0 4.16e-01 72.9% 42.3%
3287376 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.72 48.0 4.33e-01 72.9% 49.7%
4284507 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 49.0 5.42e-01 70.5% 92.4%
3581108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.41e-01 75.2% 84.2%
4928669 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 52.0 5.76e-01 76.0% 95.2%
5036311 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 51.0 5.74e-01 74.4% 98.0%
3281724 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.71 49.0 4.99e-01 77.5% 72.8%
4244628 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.70 50.0 5.67e-01 76.7% 95.0%
3289818 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.70 53.0 5.37e-01 86.0% 79.2%
5073929 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 51.0 5.45e-01 75.2% 90.9%
4373647 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 52.0 5.40e-01 77.5% 87.5%
5016457 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 45.0 5.37e-01 73.6% 98.8%
4978596 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 49.0 5.05e-01 73.6% 75.2%
4399101 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.69 44.0 4.79e-01 70.5% 75.5%
3227729 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 51.0 5.62e-01 77.5% 96.2%
4651301 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.68 46.0 4.86e-01 72.1% 76.5%
3279616 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 50.0 4.96e-01 83.7% 73.3%
4947452 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 47.0 4.28e-01 73.6% 53.5%
4649222 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.68 51.0 5.17e-01 86.0% 79.2%
5077445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 4.88e-01 82.9% 67.3%
3281997 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 44.0 4.99e-01 75.2% 89.5%
4598605 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.67 48.0 4.73e-01 83.7% 69.6%
4132207 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.67 50.0 4.83e-01 83.7% 69.0%
1888715 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.66 49.0 4.82e-01 83.7% 73.5%
5029016 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 50.0 4.77e-01 81.4% 83.0%
5076521 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.65 51.0 5.09e-01 81.4% 83.8%
3971712 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.64 46.0 4.65e-01 83.7% 73.1%
3310294 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.64 50.0 4.60e-01 82.9% 62.4%
1291586 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.64 48.0 4.72e-01 86.0% 73.4%
5049162 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 45.0 4.16e-01 73.6% 67.1%
4232356 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.63 53.0 3.53e-01 92.2% 97.9%
4443506 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.63 54.0 3.80e-01 93.0% 99.5%
3781172 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.63 53.0 3.73e-01 91.5% 99.5%
3589189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 4.28e-01 86.8% 70.4%
4996260 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.62 53.0 5.00e-01 93.0% 92.9%
3739375 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.61 51.0 5.23e-01 88.4% 92.8%
3954543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 46.0 4.47e-01 86.0% 70.6%
3194355 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.61 51.0 3.37e-01 89.9% 83.8%
3267490 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.60 50.0 4.07e-01 89.1% 59.1%
4648749 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.58 40.0 4.20e-01 71.3% 93.3%
3280999 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.57 53.0 4.96e-01 100.0% 96.8%
4600617 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.56 49.0 4.71e-01 100.0% 82.0%
3279331 101.1.2.612 alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27059 0.56 51.0 4.83e-01 100.0% 96.8%
3920054 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.55 26.0 3.47e-01 86.0% 82.9%
4968065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 48.0 4.52e-01 93.8% 97.4%
3195256 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.55 28.0 3.34e-01 86.0% 71.8%
3174328 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.54 25.0 3.37e-01 86.0% 82.9%
3961630 101.1.2.456 alpha arrays › HTH › HTH › winged helix domain › HTH_MmpR5 0.53 48.0 4.45e-01 96.9% 92.5%
4580985 101.1.2.603 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 0.53 49.0 3.48e-01 100.0% 75.5%
5049144 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 48.0 3.83e-01 99.2% 61.5%
1296342 101.1.2.456 alpha arrays › HTH › HTH › winged helix domain › HTH_MmpR5 0.52 47.0 4.47e-01 96.9% 97.3%
3940990 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.52 24.0 3.13e-01 81.4% 78.6%
3823903 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.51 36.0 3.83e-01 73.6% 95.7%
4535381 101.1.2.603 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 0.50 46.0 3.82e-01 100.0% 84.9%