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JQ011317.1__AEW24596.1__X__00044
Bact-VirJQ011317.1__AEW24596.1__X__00044
Identity
- Accession:
- JQ011317 ↗
- Kingdom:
- phage
Quality
93.1
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 64-80_110-174
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 45.0 | 4.93e-01 | 91.5% | 89.4% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 42.0 | 2.75e-01 | 70.7% | 23.5% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 42.0 | 2.72e-01 | 70.7% | 20.8% |
| 3e98B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 45.0 | 3.57e-01 | 82.9% | 43.1% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.59 | 48.0 | 3.84e-01 | 89.0% | 80.0% |
| 5fxdA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.58 | 43.0 | 3.22e-01 | 81.7% | 82.0% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.58 | 45.0 | 4.23e-01 | 85.4% | 83.5% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 48.0 | 3.12e-01 | 95.1% | 90.7% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 44.0 | 3.58e-01 | 85.4% | 85.6% |
| 2f9wA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 44.0 | 3.90e-01 | 86.6% | 83.1% |
| 3v0aB03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.49e-01 | 96.3% | 80.0% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.54 | 40.0 | 3.68e-01 | 79.3% | 97.2% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.40e-01 | 97.6% | 77.2% |
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.54 | 40.0 | 2.57e-01 | 81.7% | 35.2% |
| 2h3gX02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 44.0 | 3.60e-01 | 91.5% | 67.9% |
| 2q7bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 41.0 | 3.38e-01 | 85.4% | 82.3% |
| 4pv6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 41.0 | 3.36e-01 | 82.9% | 82.5% |
| 3hr8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.53 | 37.0 | 3.85e-01 | 96.3% | 80.0% |
| 3jq0A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 43.0 | 2.69e-01 | 89.0% | 68.0% |
| 1sazA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 44.0 | 3.49e-01 | 92.7% | 79.0% |
| 7a1rA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 39.0 | 3.51e-01 | 79.3% | 88.1% |
| 3lodA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 42.0 | 3.53e-01 | 87.8% | 77.9% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 40.0 | 3.06e-01 | 85.4% | 37.3% |
| 1pc6A00 | 1.10.3790.10 | Mainly Alpha › Orthogonal Bundle › NinB fold › NinB | 0.52 | 44.0 | 3.73e-01 | 93.9% | 60.3% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 41.0 | 3.01e-01 | 87.8% | 81.3% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.52 | 45.0 | 3.88e-01 | 93.9% | 88.3% |
| 4ka7A01 | 1.10.1370.40 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › | 0.52 | 42.0 | 2.74e-01 | 90.2% | 53.6% |
| 2r7hB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 41.0 | 3.32e-01 | 84.1% | 87.4% |
| 3dorA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 43.0 | 3.03e-01 | 89.0% | 95.3% |
| 1v89A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 3.24e-01 | 74.4% | 50.0% |
| 1y4wA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 2.94e-01 | 96.3% | 93.2% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 45.0 | 3.06e-01 | 97.6% | 63.8% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 36.0 | 3.06e-01 | 74.4% | 66.7% |
| 4bg8A01 | 3.30.420.430 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 44.0 | 3.75e-01 | 92.7% | 92.2% |
| 3pp9B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 39.0 | 3.07e-01 | 81.7% | 86.8% |
| 3mepA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 3.47e-01 | 100.0% | 60.3% |
| 3r8eA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.52e-01 | 92.7% | 92.1% |
| 6cngA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.50 | 43.0 | 3.69e-01 | 93.9% | 88.3% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077119 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 43.0 | 3.59e-01 | 78.0% | 37.3% |
| 3933536 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.62 | 43.0 | 3.61e-01 | 72.0% | 52.6% |
| 3924494 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.59 | 41.0 | 3.68e-01 | 72.0% | 61.7% |
| 5051892 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.59 | 45.0 | 3.27e-01 | 82.9% | 82.8% |
| 5039683 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 40.0 | 2.56e-01 | 70.7% | 27.6% |
| 3947082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 43.0 | 4.22e-01 | 79.3% | 100.0% |
| 3927497 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.58 | 41.0 | 4.16e-01 | 72.0% | 88.7% |
| 3986557 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.58 | 48.0 | 4.28e-01 | 90.2% | 83.5% |
| 5046168 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.58 | 43.0 | 3.13e-01 | 79.3% | 71.2% |
| 3684699 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.58 | 44.0 | 2.75e-01 | 84.1% | 45.6% |
| 3958613 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.57 | 48.0 | 4.36e-01 | 92.7% | 85.5% |
| 3204490 | 2485.1.1.30 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phe_hydrox_dim | 0.56 | 46.0 | 3.44e-01 | 90.2% | 69.7% |
| 3933422 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.56 | 39.0 | 3.37e-01 | 72.0% | 54.6% |
| 4436313 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 40.0 | 3.92e-01 | 75.6% | 85.6% |
| 4452334 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.56 | 43.0 | 3.58e-01 | 85.4% | 81.0% |
| 169324 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 44.0 | 3.57e-01 | 85.4% | 84.2% |
| 4299488 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.55 | 44.0 | 3.19e-01 | 87.8% | 82.5% |
| 5072024 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.55 | 42.0 | 3.00e-01 | 82.9% | 54.3% |
| 5074119 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.54 | 43.0 | 3.19e-01 | 89.0% | 93.6% |
| 4353121 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.54 | 38.0 | 3.61e-01 | 74.4% | 98.0% |
| 4882977 | 10.1.1.29 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Exotox-A_bind | 0.54 | 42.0 | 3.00e-01 | 86.6% | 80.7% |
| 3593777 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 40.0 | 2.48e-01 | 81.7% | 23.2% |
| 3675589 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.54 | 40.0 | 2.56e-01 | 79.3% | 45.4% |
| 4930955 | 7099.1.1.1 ↗ | a+b complex topology › VP5 N-terminal domain › VP5 N-terminal domain › VP5 N-terminal domain › Viral_env_HRPV | 0.54 | 38.0 | 2.58e-01 | 75.6% | 87.1% |
| 4944869 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 35.0 | 3.02e-01 | 74.4% | 41.5% |
| 4650117 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.53 | 37.0 | 3.77e-01 | 96.3% | 75.0% |
| 5013659 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.53 | 44.0 | 3.82e-01 | 90.2% | 94.4% |
| 4948526 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.53 | 43.0 | 2.85e-01 | 90.2% | 85.6% |
| 4660425 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.53 | 34.0 | 3.09e-01 | 73.2% | 46.1% |
| 3738102 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 42.0 | 2.78e-01 | 86.6% | 28.1% |
| 3698130 | 216.1.1.14 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med1 | 0.53 | 34.0 | 3.15e-01 | 75.6% | 51.4% |
| 3930501 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.52 | 43.0 | 3.73e-01 | 89.0% | 86.4% |
| 3665695 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.52 | 42.0 | 2.68e-01 | 90.2% | 63.4% |
| 3932481 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.51 | 43.0 | 3.75e-01 | 93.9% | 91.5% |
| 409974 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 39.0 | 3.07e-01 | 81.7% | 86.8% |
| 3295308 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.51 | 35.0 | 2.48e-01 | 70.7% | 32.1% |
| 4278807 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.51 | 39.0 | 3.59e-01 | 82.9% | 90.9% |
| 3929144 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 42.0 | 2.71e-01 | 89.0% | 32.8% |
| 1123736 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.51 | 42.0 | 2.87e-01 | 92.7% | 89.4% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 34.0 | 3.20e-01 | 73.2% | 53.8% |
| 3518382 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.51 | 42.0 | 4.24e-01 | 92.7% | 87.1% |
| 4965528 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 2.96e-01 | 86.6% | 68.0% |
| 3587596 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 38.0 | 3.10e-01 | 84.1% | 90.9% |