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JQ062992.1__AEV89280.1__phIS3501_016__00015

Bact-Vir

JQ062992.1__AEV89280.1__phIS3501_016__00015

Identity

Accession:
JQ062992 ↗
Kingdom:
phage

Quality

96.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Camtrevirus› Bacillus_phage_phIS3501

TaxID: 1124578

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 63.0 6.43e-01 98.3% 94.7%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 65.0 6.47e-01 100.0% 93.5%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 6.27e-01 100.0% 87.9%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 60.0 5.47e-01 100.0% 70.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 61.0 5.79e-01 98.3% 81.4%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.43e-01 98.3% 70.9%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.57e-01 100.0% 74.4%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.17e-01 100.0% 65.1%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 4.77e-01 100.0% 48.7%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.77e-01 100.0% 92.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 5.74e-01 98.3% 94.9%
1g2bA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 45.0 4.53e-01 71.7% 67.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.29e-01 100.0% 72.8%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 56.0 5.73e-01 98.3% 98.3%
5of3A00 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.66 48.0 2.98e-01 100.0% 14.4%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.65e-01 96.7% 92.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 55.0 5.58e-01 96.7% 98.3%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 4.91e-01 98.3% 66.3%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.26e-01 100.0% 82.4%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 5.45e-01 91.7% 100.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.81e-01 100.0% 85.7%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 5.06e-01 98.3% 88.6%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.87e-01 100.0% 89.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 44.0 4.59e-01 96.7% 87.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.00e-01 100.0% 54.4%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.60 52.0 4.49e-01 100.0% 66.0%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.60 43.0 3.59e-01 100.0% 41.6%
4c97A02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 53.0 4.05e-01 100.0% 91.0%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.59 39.0 4.00e-01 93.3% 71.9%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 37.0 3.76e-01 80.0% 64.4%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.58 48.0 3.70e-01 95.0% 67.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.30e-01 95.0% 83.9%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 3.94e-01 85.0% 68.7%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.57 47.0 4.02e-01 100.0% 70.1%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.56 44.0 3.38e-01 90.0% 60.6%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.12e-01 100.0% 90.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 39.0 3.57e-01 100.0% 52.9%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.54 43.0 3.19e-01 90.0% 39.7%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.54 45.0 4.48e-01 100.0% 93.7%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 44.0 3.47e-01 98.3% 99.3%
3b6hA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 39.0 2.39e-01 85.0% 62.5%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 39.0 3.79e-01 96.7% 72.2%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3782325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 64.0 6.29e-01 100.0% 92.1%
3908332 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 64.0 6.23e-01 100.0% 89.2%
3398175 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 63.0 6.19e-01 100.0% 89.2%
4081631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 63.0 5.86e-01 100.0% 77.3%
3270519 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 62.0 6.08e-01 100.0% 89.2%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 62.0 5.75e-01 100.0% 77.3%
3514867 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 60.0 5.59e-01 100.0% 76.0%
3880325 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 60.0 5.73e-01 98.3% 81.4%
3541996 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.70 59.0 4.13e-01 100.0% 29.5%
3482683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.93e-01 100.0% 93.3%
3224441 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.71e-01 100.0% 83.8%
3909202 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.67e-01 100.0% 82.9%
2890675 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 59.0 5.82e-01 100.0% 89.1%
3523584 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.64e-01 98.3% 78.7%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.71e-01 100.0% 87.7%
3924038 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.66e-01 100.0% 84.0%
3900236 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.70e-01 96.7% 93.3%
3741878 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 61.0 5.98e-01 100.0% 92.3%
3480204 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 61.0 5.98e-01 100.0% 92.3%
3759402 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.82e-01 100.0% 93.8%
3591824 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 59.0 5.64e-01 98.3% 84.3%
4981952 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.68 49.0 5.36e-01 100.0% 92.0%
3850131 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 59.0 5.30e-01 100.0% 71.8%
4196229 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.67 58.0 5.55e-01 98.3% 88.6%
3897333 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 59.0 5.41e-01 100.0% 75.0%
3396897 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 60.0 5.90e-01 100.0% 95.2%
5000438 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.67 49.0 4.62e-01 100.0% 65.7%
3843554 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 58.0 5.57e-01 100.0% 84.3%
3215937 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.16e-01 100.0% 84.4%
4956745 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.66 50.0 5.44e-01 100.0% 96.0%
3793311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 57.0 5.72e-01 100.0% 100.0%
5063665 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.65 46.0 5.24e-01 100.0% 100.0%
3344796 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 52.0 4.77e-01 96.7% 66.3%
3575066 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 55.0 5.55e-01 98.3% 100.0%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.87e-01 96.7% 87.3%
3790978 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.21e-01 100.0% 85.7%
3627275 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.28e-01 95.0% 96.7%
4932061 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.62 44.0 4.94e-01 98.3% 100.0%
4040055 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.62 49.0 5.03e-01 88.3% 94.8%
4928679 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.62 44.0 4.75e-01 100.0% 90.0%
4117297 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.82e-01 100.0% 80.0%
4460255 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.62 44.0 4.69e-01 100.0% 90.0%
5035097 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.61 43.0 4.79e-01 100.0% 100.0%
4951587 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.61 43.0 4.63e-01 100.0% 90.0%
4083057 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.60 42.0 4.56e-01 100.0% 90.0%
4939553 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.60 42.0 4.54e-01 100.0% 90.0%
4226849 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 44.0 4.12e-01 100.0% 63.7%
3174419 220.1.1.190 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26660 0.59 45.0 3.73e-01 90.0% 64.0%
3963450 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.59 44.0 3.54e-01 100.0% 38.5%
5001806 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.58 42.0 4.62e-01 100.0% 97.9%
3973145 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 43.0 4.44e-01 86.7% 87.3%
4593896 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.58 40.0 4.40e-01 98.3% 97.8%
4057802 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.58 40.0 4.45e-01 100.0% 100.0%
4934987 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.56 39.0 4.25e-01 98.3% 97.8%
4982370 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.55 35.0 3.91e-01 93.3% 97.5%
4419456 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.55 39.0 4.23e-01 100.0% 95.9%
4013893 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.55 45.0 3.75e-01 100.0% 70.0%
3796684 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.06e-01 96.7% 78.8%
4200990 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.53 39.0 4.13e-01 100.0% 96.0%
5038458 4076.4.1.0 ↗ a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.52 39.0 4.23e-01 98.3% 98.0%
3173653 220.1.1.190 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26660 0.52 40.0 3.45e-01 90.0% 66.4%
3598080 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 42.0 2.76e-01 100.0% 37.1%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 40.0 3.96e-01 100.0% 84.4%
3473808 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.51 43.0 2.67e-01 100.0% 18.5%
3800755 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.51 42.0 2.49e-01 98.3% 15.2%
5061147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 44.0 3.80e-01 100.0% 63.2%
2512597 3156.1.1.3 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind 0.50 35.0 2.76e-01 73.3% 68.2%