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JQ177062.1__AFC22525.1__phi1422_0005__00005
Bact-VirJQ177062.1__AFC22525.1__phi1422_0005__00005
Identity
- Accession:
- JQ177062 ↗
- Kingdom:
- phage
Quality
67.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dzaA01 | 1.20.120.1940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain | 0.70 | 60.0 | 4.84e-01 | 98.3% | 77.8% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.68 | 56.0 | 4.64e-01 | 100.0% | 85.7% |
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.68 | 45.0 | 3.24e-01 | 70.7% | 24.1% |
| 1o82A00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.65 | 53.0 | 5.11e-01 | 98.3% | 90.0% |
| 1floA01 | 3.30.300.80 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › FLP Recombinase, lambda integrase-like, N-terminal domain (domain 1) | 0.62 | 48.0 | 4.09e-01 | 89.7% | 81.9% |
| 2zm5A02 | 1.10.20.140 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.58 | 45.0 | 4.25e-01 | 91.4% | 69.4% |
| 5hxgB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.58 | 42.0 | 4.09e-01 | 100.0% | 69.2% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.58 | 39.0 | 3.75e-01 | 98.3% | 60.3% |
| 1dm1A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 42.0 | 3.23e-01 | 81.0% | 84.2% |
| 6lpfA01 | 1.10.730.20 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › | 0.57 | 51.0 | 3.65e-01 | 100.0% | 54.6% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 44.0 | 4.17e-01 | 87.9% | 91.2% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.52 | 43.0 | 4.34e-01 | 100.0% | 94.8% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 44.0 | 3.79e-01 | 100.0% | 80.0% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.51 | 38.0 | 3.60e-01 | 100.0% | 66.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3600071 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.70 | 49.0 | 4.76e-01 | 74.1% | 84.6% |
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.70 | 47.0 | 4.44e-01 | 70.7% | 92.9% |
| 3969479 | 628.1.1.0 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain | 0.69 | 60.0 | 4.59e-01 | 100.0% | 54.3% |
| 3592477 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.66 | 45.0 | 4.52e-01 | 100.0% | 70.0% |
| 3236863 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.64 | 47.0 | 2.82e-01 | 100.0% | 11.0% |
| 3205548 | 632.7.1.51 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Etd1 | 0.63 | 42.0 | 3.97e-01 | 98.3% | 57.1% |
| 3928650 | 101.1.1.315 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CCD_aECM | 0.59 | 49.0 | 4.86e-01 | 100.0% | 88.3% |
| 3969541 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.58 | 47.0 | 3.89e-01 | 94.8% | 64.3% |
| 3492325 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.58 | 45.0 | 3.16e-01 | 82.8% | 32.4% |
| None | — | 0.57 | 49.0 | 3.45e-01 | 100.0% | 52.5% | |
| 3991367 | 101.1.2.558 ↗ | alpha arrays › HTH › HTH › winged helix domain › CCD_aECM | 0.53 | 43.0 | 4.45e-01 | 98.3% | 96.4% |
| 3686751 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.50 | 41.0 | 3.75e-01 | 100.0% | 67.5% |