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JQ177062.1__AFC22579.1__phi1422_0059__00059
Bact-VirJQ177062.1__AFC22579.1__phi1422_0059__00059
Identity
- Accession:
- JQ177062 ↗
- Kingdom:
- phage
Quality
54.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-58_190-369
D2
high
residues 63-186
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dw9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 40.0 | 4.60e-01 | 83.9% | 93.1% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 37.0 | 4.34e-01 | 91.9% | 89.0% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 37.0 | 4.09e-01 | 91.9% | 76.5% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.59 | 49.0 | 4.57e-01 | 90.3% | 91.6% |
| 2iw5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 35.0 | 3.74e-01 | 89.5% | 70.6% |
| 2kzcA00 | 1.10.790.20 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Domain of unknown function DUF1476 | 0.54 | 33.0 | 3.77e-01 | 96.0% | 85.9% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 36.0 | 3.92e-01 | 82.3% | 83.0% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 38.0 | 3.66e-01 | 76.6% | 95.3% |
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 41.0 | 3.66e-01 | 83.1% | 74.6% |
| 2oebA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.52 | 34.0 | 3.19e-01 | 86.3% | 52.6% |
| 4jbeB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 39.0 | 3.12e-01 | 82.3% | 81.2% |
| 3uitA02 | 1.20.1270.460 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 36.0 | 3.59e-01 | 75.0% | 92.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945172 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.80 | 76.0 | 6.20e-01 | 100.0% | 59.0% |
| 3513464 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.80 | 72.0 | 7.28e-01 | 96.8% | 98.4% |
| 4013825 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 34.0 | 4.23e-01 | 89.5% | 81.3% |
| 3322236 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 32.0 | 4.03e-01 | 87.9% | 81.3% |
| 4284151 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 35.0 | 4.04e-01 | 93.5% | 80.0% |
| 3947752 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.60 | 45.0 | 3.51e-01 | 80.6% | 94.8% |
| 4028998 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 44.0 | 4.17e-01 | 76.6% | 85.5% |
| 3955500 | 101.1.2.655 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF732 | 0.58 | 34.0 | 4.00e-01 | 84.7% | 88.5% |
| 4999090 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 36.0 | 3.57e-01 | 91.1% | 58.5% |
| 4157604 | 4952.1.1.6 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › NA37 | 0.57 | 33.0 | 3.77e-01 | 93.5% | 77.8% |
| 3607683 | 3187.1.1.0 ↗ | alpha bundles › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein | 0.56 | 43.0 | 3.91e-01 | 81.5% | 82.9% |
| 3993676 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.56 | 32.0 | 3.43e-01 | 75.0% | 64.8% |
| 3691086 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 32.0 | 3.69e-01 | 78.2% | 76.7% |
| 4014053 | 148.1.3.216 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7069 | 0.55 | 31.0 | 3.71e-01 | 88.7% | 83.7% |
| 4526835 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.55 | 39.0 | 3.60e-01 | 74.2% | 62.4% |
| 4927627 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.55 | 35.0 | 3.83e-01 | 91.9% | 77.1% |
| 4145892 | 3949.1.1.2 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › DUF3603 | 0.54 | 36.0 | 4.11e-01 | 71.0% | 94.4% |
| 4098259 | 110.1.1.13 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › DUF3603 | 0.53 | 39.0 | 4.26e-01 | 76.6% | 98.0% |