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JQ182730.1__AFM76189.1__mEp237_034__00034
Bact-VirJQ182730.1__AFM76189.1__mEp237_034__00034
Identity
- Accession:
- JQ182730 ↗
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-125
Domain cluster:
rep: MN428057.1__QFP97008.1__SEA_SUERTE_37__00037__D9-115
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.78 | 67.0 | 6.30e-01 | 100.0% | 76.5% |
| 4rljA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.69 | 39.0 | 3.76e-01 | 71.8% | 47.9% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.68 | 35.0 | 3.63e-01 | 75.0% | 52.1% |
| 1pn2B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.67 | 41.0 | 3.90e-01 | 80.6% | 51.4% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.66 | 55.0 | 5.52e-01 | 100.0% | 88.0% |
| 6jqlA03 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.66 | 39.0 | 3.47e-01 | 82.3% | 40.4% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.65 | 48.0 | 4.46e-01 | 79.8% | 60.6% |
| 3b7kB01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.65 | 39.0 | 3.80e-01 | 79.0% | 52.9% |
| 2gvhB02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 38.0 | 3.93e-01 | 76.6% | 61.5% |
| 2essA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 41.0 | 3.90e-01 | 87.1% | 55.2% |
| 1yliB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 43.0 | 4.09e-01 | 81.5% | 58.1% |
| 2nujA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 44.0 | 4.12e-01 | 87.1% | 58.8% |
| 2w3xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 44.0 | 4.18e-01 | 87.1% | 60.4% |
| 1y7uA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 40.0 | 3.63e-01 | 79.0% | 47.6% |
| 1lo7A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 43.0 | 4.18e-01 | 88.7% | 63.6% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.60 | 32.0 | 2.47e-01 | 85.5% | 23.1% |
| 2q2bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 37.0 | 3.58e-01 | 78.2% | 53.9% |
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.59 | 43.0 | 3.98e-01 | 75.8% | 95.0% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.58 | 36.0 | 2.78e-01 | 83.9% | 25.5% |
| 4ffuB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 41.0 | 3.89e-01 | 75.0% | 96.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 34.0 | 3.89e-01 | 80.6% | 78.9% |
| 1sh8B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 39.0 | 3.68e-01 | 71.0% | 100.0% |
| 1e54A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.56 | 39.0 | 2.82e-01 | 71.8% | 98.8% |
| 3ck1A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 37.0 | 3.61e-01 | 87.1% | 58.7% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.55 | 40.0 | 3.06e-01 | 73.4% | 96.7% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 40.0 | 3.79e-01 | 75.8% | 81.8% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.55 | 38.0 | 3.29e-01 | 72.6% | 87.3% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.55 | 38.0 | 3.18e-01 | 72.6% | 100.0% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.54 | 42.0 | 3.56e-01 | 81.5% | 60.1% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 45.0 | 4.15e-01 | 91.1% | 75.3% |
| 1kt8A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 39.0 | 3.43e-01 | 77.4% | 80.3% |
| 2xh6B01 | 2.170.15.20 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › | 0.53 | 40.0 | 3.66e-01 | 80.6% | 93.5% |
| 3uezC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 30.0 | 3.57e-01 | 72.6% | 83.1% |
| 6qwrA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 38.0 | 3.34e-01 | 75.8% | 100.0% |
| 1dwnA00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.52 | 35.0 | 3.50e-01 | 76.6% | 66.9% |
| 1uunA01 | 2.60.40.1650 | Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) | 0.51 | 39.0 | 3.88e-01 | 79.8% | 81.8% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 40.0 | 3.73e-01 | 83.1% | 95.4% |
| 2ooiA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.51 | 38.0 | 3.58e-01 | 86.3% | 63.6% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.50 | 41.0 | 2.87e-01 | 87.9% | 92.8% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4199388 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.80 | 71.0 | 6.71e-01 | 98.4% | 80.0% |
| 5037833 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.79 | 72.0 | 6.78e-01 | 96.8% | 88.3% |
| 3604380 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.79 | 68.0 | 6.42e-01 | 100.0% | 77.9% |
| 4937367 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.77 | 66.0 | 6.62e-01 | 96.8% | 90.4% |
| 5037015 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.77 | 68.0 | 6.63e-01 | 100.0% | 86.7% |
| 4279828 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.75 | 69.0 | 6.18e-01 | 100.0% | 81.8% |
| 4540264 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.74 | 67.0 | 6.32e-01 | 99.2% | 85.3% |
| 5077163 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.73 | 66.0 | 6.45e-01 | 97.6% | 89.6% |
| 5014602 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.72 | 64.0 | 6.30e-01 | 97.6% | 90.8% |
| 4136159 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.70 | 55.0 | 4.91e-01 | 82.3% | 97.7% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.69 | 49.0 | 4.52e-01 | 79.8% | 56.9% |
| 3326287 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.67 | 48.0 | 4.94e-01 | 78.2% | 77.5% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.66 | 49.0 | 4.34e-01 | 78.2% | 54.3% |
| 4823574 | 4030.1.1.1 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F_actin_cap_B | 0.66 | 48.0 | 4.45e-01 | 79.0% | 59.6% |
| 3596114 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.66 | 42.0 | 3.67e-01 | 81.5% | 42.6% |
| 4648616 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.63 | 39.0 | 3.61e-01 | 71.8% | 48.1% |
| 3640057 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.63 | 43.0 | 3.62e-01 | 80.6% | 40.5% |
| 3225304 | 11.1.5.20 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › NDT80_PhoG | 0.62 | 43.0 | 3.65e-01 | 70.2% | 99.0% |
| 3710825 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.62 | 47.0 | 4.10e-01 | 83.9% | 53.0% |
| 6050 | 222.1.1.8 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 | 0.62 | 43.0 | 4.18e-01 | 88.7% | 63.6% |
| 5034752 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.61 | 49.0 | 4.30e-01 | 86.3% | 92.6% |
| 2325211 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 42.0 | 3.82e-01 | 72.6% | 93.0% |
| 3195296 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.58 | 43.0 | 3.63e-01 | 77.4% | 87.1% |
| 3599587 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 52.0 | 4.54e-01 | 98.4% | 76.2% |
| 1112109 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.57 | 39.0 | 3.26e-01 | 70.2% | 65.2% |
| 3975352 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.57 | 42.0 | 3.97e-01 | 77.4% | 79.1% |
| 5056621 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.56 | 44.0 | 4.13e-01 | 83.1% | 81.9% |
| 4331617 | 5084.1.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW | 0.56 | 41.0 | 3.54e-01 | 75.8% | 100.0% |
| 4983436 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.55 | 37.0 | 3.11e-01 | 75.8% | 41.0% |
| 3695321 | 11.1.5.20 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › NDT80_PhoG | 0.55 | 38.0 | 3.20e-01 | 71.0% | 99.1% |
| None | — | 0.55 | 40.0 | 3.79e-01 | 75.8% | 81.8% | |
| 3280845 | 11.13.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › MspA | 0.55 | 41.0 | 3.81e-01 | 76.6% | 82.0% |
| 884 | 5084.2.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › OpcA | 0.55 | 38.0 | 3.18e-01 | 72.6% | 100.0% |
| 5043164 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.53 | 38.0 | 3.08e-01 | 75.0% | 39.1% |
| 3702180 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.53 | 33.0 | 3.25e-01 | 79.8% | 57.8% |
| 3928774 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.53 | 42.0 | 3.46e-01 | 84.7% | 73.2% |
| 4417262 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.53 | 40.0 | 3.62e-01 | 79.8% | 78.4% |
| 3241156 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 42.0 | 3.51e-01 | 84.7% | 75.2% |
| 3249129 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.52 | 42.0 | 3.59e-01 | 84.7% | 75.9% |
| 5041783 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.52 | 37.0 | 3.16e-01 | 74.2% | 91.2% |
| 166738 | 11.13.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › MspA | 0.52 | 40.0 | 3.93e-01 | 79.8% | 81.8% |
| 3857562 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.51 | 41.0 | 3.40e-01 | 84.7% | 71.2% |
| 5043396 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.51 | 36.0 | 3.06e-01 | 73.4% | 89.8% |
| 4197411 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.51 | 39.0 | 3.44e-01 | 83.9% | 79.0% |