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JQ245709.1__AEZ50174.1__X__00001
Bact-VirJQ245709.1__AEZ50174.1__X__00001
Identity
- Accession:
- JQ245709 ↗
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-148
Domain cluster:
rep: OR354850.1__WNM55334.1__CoNPh27_CDS0068__00068__D76-191
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bjqA00 | 3.90.1690.10 | Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain | 0.93 | 83.0 | 5.91e-01 | 100.0% | 35.8% |
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.81 | 52.0 | 5.74e-01 | 82.5% | 79.8% |
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.75 | 52.0 | 5.70e-01 | 100.0% | 86.3% |
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.74 | 55.0 | 5.70e-01 | 100.0% | 83.8% |
| 6xgpB01 | 3.30.1930.10 | Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain | 0.71 | 65.0 | 6.13e-01 | 98.2% | 91.0% |
| 3bqwA02 | 3.30.1930.10 | Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain | 0.69 | 64.0 | 6.02e-01 | 100.0% | 88.3% |
| 4rlqA02 | 3.40.50.12820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 36.0 | 4.28e-01 | 78.1% | 78.7% |
| 1yueA03 | 3.30.2320.40 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.64 | 54.0 | 5.36e-01 | 100.0% | 86.0% |
| 1ur4A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 46.0 | 3.22e-01 | 93.9% | 75.1% |
| 1dgmA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 47.0 | 3.65e-01 | 100.0% | 90.2% |
| 1cvlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 47.0 | 3.51e-01 | 100.0% | 96.5% |
| 8idpB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 44.0 | 3.20e-01 | 93.9% | 71.7% |
| 4hu8A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 43.0 | 3.12e-01 | 93.0% | 76.2% |
| 1cpyA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 46.0 | 3.34e-01 | 100.0% | 94.0% |
| 2qxlB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 43.0 | 4.11e-01 | 100.0% | 76.9% |
| 5t99A03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 3.27e-01 | 93.9% | 66.8% |
| 1ii7B02 | 3.30.110.80 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › DNA double-strand break repair nuclease | 0.51 | 34.0 | 3.81e-01 | 94.7% | 92.8% |
| 4w5uB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 42.0 | 3.16e-01 | 93.0% | 81.9% |
| 2khoA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 45.0 | 4.07e-01 | 100.0% | 79.2% |
| 3kv1A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 3.27e-01 | 91.2% | 81.0% |
| 5umbA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 45.0 | 3.89e-01 | 100.0% | 85.6% |
| 3aiiA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 45.0 | 3.30e-01 | 98.2% | 65.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 333200 | 2485.3.1.1 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E | 0.92 | 87.0 | 6.09e-01 | 100.0% | 37.0% |
| 11367 | 2485.3.1.6 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › ENCP4 | 0.81 | 52.0 | 5.74e-01 | 82.5% | 79.8% |
| 4988094 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.76 | 63.0 | 4.74e-01 | 100.0% | 38.8% |
| 2443966 | 2485.3.1.1 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E | 0.75 | 69.0 | 4.61e-01 | 100.0% | 31.5% |
| 4937661 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.69 | 38.0 | 4.08e-01 | 92.1% | 61.0% |
| 1005479 | 2485.3.1.1 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E | 0.69 | 64.0 | 4.48e-01 | 100.0% | 34.9% |
| 4889260 | 2485.3.1.12 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 | 0.67 | 56.0 | 4.28e-01 | 100.0% | 38.9% |
| 2995627 | 2485.3.1.7 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside | 0.66 | 56.0 | 4.12e-01 | 100.0% | 35.3% |
| 3110810 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.65 | 53.0 | 4.06e-01 | 87.7% | 43.0% |
| 3170949 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.64 | 46.0 | 4.98e-01 | 82.5% | 88.4% |
| 4929755 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.63 | 58.0 | 4.31e-01 | 100.0% | 41.5% |
| 3965498 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.63 | 58.0 | 4.12e-01 | 100.0% | 35.8% |
| 4097188 | 298.4.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › FliH | 0.58 | 38.0 | 3.91e-01 | 93.9% | 69.1% |
| 4638799 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.57 | 36.0 | 3.57e-01 | 87.7% | 58.4% |
| 4389834 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.55 | 48.0 | 4.17e-01 | 94.7% | 79.4% |
| 3270371 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 49.0 | 3.58e-01 | 100.0% | 86.7% |
| 3393827 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 40.0 | 4.22e-01 | 82.5% | 86.0% |
| 3722434 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 43.0 | 4.40e-01 | 83.3% | 93.6% |
| 3912224 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 41.0 | 3.00e-01 | 81.6% | 50.6% |
| 3928011 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.54 | 39.0 | 4.34e-01 | 82.5% | 98.8% |
| 3251469 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.53 | 41.0 | 4.33e-01 | 83.3% | 94.2% |
| 1866755 | 3277.3.1.1 ↗ | alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › Cas3 inhibitor AcrF3 › Cas3 inhibitor AcrF3 › AcrF3 | 0.52 | 37.0 | 3.51e-01 | 74.6% | 93.5% |
| 3589784 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.51 | 43.0 | 3.34e-01 | 93.0% | 94.1% |
| 3685000 | 7579.1.1.16 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Palm_thioest | 0.51 | 45.0 | 3.32e-01 | 100.0% | 84.5% |
| 3987511 | 7579.1.1.254 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3, Mbeg1-like | 0.51 | 43.0 | 3.33e-01 | 94.7% | 62.6% |