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JQ288021.1__AFB83845.1__SPN3UB_0059__00059
Bact-VirJQ288021.1__AFB83845.1__SPN3UB_0059__00059
Identity
- Accession:
- JQ288021 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-72
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.66e-01 | 80.6% | 48.1% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.72e-01 | 87.5% | 53.7% |
| 1jeyA03 | 4.10.970.10 | Few Secondary Structures › Irregular › Ku70, bridge and pillars › Ku70, bridge and pillars | 0.51 | 22.0 | 2.38e-01 | 76.4% | 42.9% |
| 1ni3A02 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.50 | 36.0 | 3.25e-01 | 75.0% | 85.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039979 | 604.2.1.1 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C | 0.55 | 37.0 | 3.07e-01 | 70.8% | 86.7% |
| 3656580 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.52 | 38.0 | 2.98e-01 | 81.9% | 71.4% |
| 3250449 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.51 | 36.0 | 2.62e-01 | 76.4% | 76.5% |