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JQ341413.1__AFF27978.1__phiYS61_20__00021

Bact-Vir

JQ341413.1__AFF27978.1__phiYS61_20__00021

Identity

Accession:
JQ341413 ↗
Kingdom:
phage

Quality

55.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Weissella_phage_phiYS61

TaxID: 1161906

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-140
PDB
Domain cluster: rep: NC_073481.1__YP_010756090.1__QEJ66_gp08__00008__D21-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18013.7 best Phage_lysozyme2 67.6 1.80e-18 98.5% 86.1%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ct5A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.87 84.0 7.83e-01 100.0% 83.6%
3fi7A01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.66 53.0 5.36e-01 100.0% 86.9%
6ukcA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.64 54.0 5.42e-01 100.0% 89.5%
6fakA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.63 34.0 4.24e-01 79.9% 85.2%
4yf2A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.63 52.0 5.27e-01 100.0% 90.0%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.62 49.0 5.13e-01 94.8% 91.1%
1xsfA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.62 38.0 4.23e-01 92.5% 75.9%
153lA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.61 54.0 4.85e-01 100.0% 69.7%
1am7A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.60 51.0 4.86e-01 90.3% 91.6%
3w6bB00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.58 52.0 5.04e-01 100.0% 86.3%
1f5qB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 33.0 3.67e-01 91.0% 75.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1253692 235.1.1.23 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 0.87 84.0 7.72e-01 100.0% 82.1%
3284481 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.70 61.0 6.01e-01 100.0% 87.1%
3396023 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.67 52.0 5.50e-01 100.0% 90.8%
4282584 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.67 62.0 5.54e-01 100.0% 86.5%
3838879 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.67 60.0 5.82e-01 100.0% 87.2%
3527879 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.65 52.0 5.29e-01 100.0% 86.2%
3398878 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.64 51.0 5.42e-01 100.0% 95.0%
3985073 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.63 52.0 5.19e-01 95.5% 86.7%
3947473 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.63 52.0 4.99e-01 96.3% 78.7%
3979308 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.60 55.0 5.05e-01 100.0% 89.7%
4009649 632.3.1.13 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 0.59 52.0 4.89e-01 100.0% 81.1%
3245104 235.1.1.12 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.57 47.0 4.85e-01 97.0% 92.8%
3977749 235.1.1.5 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly 0.54 46.0 4.31e-01 92.5% 77.0%
D2 high residues 179-375
PDB