←Back to structures
JQ362498.1__AFF28090.1__PAU_92__00085
Bact-VirJQ362498.1__AFF28090.1__PAU_92__00085
Identity
- Accession:
- JQ362498 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Cluster
View cluster (241 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-183
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.75 | 59.0 | 6.02e-01 | 97.0% | 84.0% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.73 | 58.0 | 6.09e-01 | 98.2% | 91.9% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.72 | 57.0 | 5.82e-01 | 97.0% | 85.0% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 31.0 | 4.06e-01 | 81.4% | 70.8% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.69 | 26.0 | 2.84e-01 | 97.6% | 41.0% |
| 2yn3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 25.0 | 3.65e-01 | 80.2% | 73.2% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 28.0 | 3.65e-01 | 80.8% | 72.8% |
| 1b64A00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.63 | 26.0 | 3.49e-01 | 75.4% | 69.2% |
| 3d3lA02 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 24.0 | 3.41e-01 | 97.0% | 76.2% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 26.0 | 3.25e-01 | 80.8% | 66.0% |
| 4r6uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 22.0 | 2.88e-01 | 79.6% | 60.2% |
| 3o4oC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 26.0 | 3.16e-01 | 81.4% | 66.4% |
| 2zkmX04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 30.0 | 3.38e-01 | 100.0% | 68.5% |
| 4dguA01 | 2.60.40.2680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 29.0 | 3.44e-01 | 97.6% | 75.9% |
| 1elvA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 29.0 | 3.64e-01 | 97.6% | 88.8% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 34.0 | 3.62e-01 | 99.4% | 73.9% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.53 | 38.0 | 4.15e-01 | 92.2% | 91.2% |
| 1djxA03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 31.0 | 3.41e-01 | 99.4% | 71.0% |
| 2d9qB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 30.0 | 3.82e-01 | 83.8% | 98.9% |
| 7kz9B01 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.52 | 34.0 | 3.39e-01 | 89.2% | 61.8% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.51 | 29.0 | 3.07e-01 | 85.0% | 59.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.90 | 79.0 | 7.99e-01 | 98.2% | 92.0% |
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.90 | 76.0 | 7.92e-01 | 99.4% | 94.2% |
| 4995819 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.87 | 75.0 | 7.97e-01 | 97.0% | 100.0% |
| 4995820 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.86 | 66.0 | 7.46e-01 | 95.8% | 100.0% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.85 | 67.0 | 7.15e-01 | 100.0% | 91.9% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.84 | 68.0 | 7.34e-01 | 100.0% | 97.9% |
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.84 | 56.0 | 6.75e-01 | 99.4% | 99.1% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.83 | 67.0 | 7.15e-01 | 100.0% | 95.2% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.83 | 65.0 | 7.07e-01 | 100.0% | 95.7% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.83 | 69.0 | 7.25e-01 | 100.0% | 96.6% |
| 3096576 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.82 | 69.0 | 7.09e-01 | 99.4% | 91.2% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.81 | 57.0 | 6.43e-01 | 98.2% | 92.9% |
| 3023894 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.81 | 67.0 | 7.13e-01 | 98.8% | 96.6% |
| 4959370 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.79 | 25.0 | 2.50e-01 | 99.4% | 28.6% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 57.0 | 6.54e-01 | 94.6% | 100.0% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.76 | 57.0 | 6.41e-01 | 99.4% | 100.0% |
| 3942828 | 1.1.13.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 | 0.76 | 62.0 | 6.67e-01 | 100.0% | 99.3% |
| 136185 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.75 | 59.0 | 6.02e-01 | 97.0% | 84.0% |
| 1563850 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.72 | 57.0 | 5.82e-01 | 97.0% | 85.0% |
| 2074267 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.71 | 59.0 | 6.02e-01 | 98.2% | 90.6% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 63.0 | 6.46e-01 | 97.0% | 100.0% |
| 3590380 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 61.0 | 5.99e-01 | 99.4% | 86.7% |
| 5004308 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 59.0 | 6.12e-01 | 100.0% | 96.8% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 57.0 | 5.90e-01 | 97.0% | 92.9% |
| 5057186 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 30.0 | 3.92e-01 | 85.6% | 74.4% |
| 4030848 | 1.1.13.52 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 | 0.63 | 54.0 | 5.55e-01 | 97.0% | 92.6% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 52.0 | 4.97e-01 | 94.0% | 82.6% |
| 3977799 | 304.109.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › YecR | 0.57 | 30.0 | 3.97e-01 | 85.0% | 96.5% |
| 3577271 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 22.0 | 3.55e-01 | 78.4% | 98.3% |
| 3735515 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 31.0 | 3.48e-01 | 100.0% | 68.5% |
| 3789174 | 11.2.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 | 0.55 | 32.0 | 3.57e-01 | 99.4% | 72.3% |
| 3898062 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 33.0 | 3.32e-01 | 100.0% | 56.6% |
| 3314868 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 30.0 | 3.29e-01 | 100.0% | 64.3% |
| 3180005 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 30.0 | 3.42e-01 | 99.4% | 72.0% |
| 3223884 | 11.2.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GDE1 | 0.52 | 32.0 | 3.47e-01 | 99.4% | 70.3% |
| 3631712 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 30.0 | 3.25e-01 | 100.0% | 64.1% |
| 3175675 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 30.0 | 3.29e-01 | 99.4% | 68.5% |
| 3621981 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 29.0 | 3.18e-01 | 99.4% | 66.7% |
| 3782892 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 29.0 | 3.29e-01 | 98.8% | 72.0% |
| 4021538 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 30.0 | 3.36e-01 | 99.4% | 75.8% |