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JQ362498.1__AFF28112.1__PAU_114__00107

Bact-Vir

JQ362498.1__AFF28112.1__PAU_114__00107

Identity

Accession:
JQ362498 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sphingomonas_phage_PAU

TaxID: 1150991

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-133_229-263
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6igsB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.75 53.0 4.97e-01 71.6% 70.1%
1pzmA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.73 54.0 5.10e-01 76.6% 70.6%
3obwA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.65 46.0 4.94e-01 87.2% 85.6%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 44.0 3.54e-01 71.6% 94.9%
5d6nA00 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.63 46.0 3.19e-01 75.9% 32.7%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.63 48.0 5.07e-01 92.2% 91.8%
3om0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 44.0 4.25e-01 73.0% 66.9%
7eqiA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.62 52.0 5.09e-01 90.1% 96.1%
4rsmA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 44.0 4.31e-01 73.0% 88.7%
1mqsA02 3.40.50.1910 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 2 0.61 56.0 4.88e-01 97.9% 76.4%
4pyrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 43.0 4.59e-01 73.0% 84.2%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 43.0 4.19e-01 73.8% 75.5%
4opfA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 53.0 3.94e-01 97.2% 59.4%
5by7A01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 50.0 4.57e-01 91.5% 93.7%
2c7yA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.59 53.0 3.89e-01 99.3% 96.9%
3szuA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.59 41.0 4.75e-01 98.6% 100.0%
3ledA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 49.0 4.28e-01 91.5% 92.7%
4hi0E00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 42.0 3.80e-01 90.8% 54.1%
1u6zA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 44.0 4.68e-01 92.2% 92.5%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 43.0 4.15e-01 100.0% 68.1%
4tkzA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.57 39.0 4.08e-01 91.5% 75.4%
4ernA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 47.0 4.07e-01 91.5% 72.9%
5q22A02 3.40.50.12650 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 41.0 4.12e-01 75.9% 96.6%
3r2uA02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.56 34.0 4.23e-01 90.8% 100.0%
3hjgA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.56 47.0 4.18e-01 90.8% 86.6%
2qniA01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.56 47.0 4.26e-01 90.8% 89.4%
2a3nA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 39.0 3.78e-01 73.8% 71.0%
1qz9A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 43.0 3.57e-01 84.4% 55.9%
3fjyA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 45.0 4.28e-01 90.1% 86.6%
3rgoA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 37.0 3.65e-01 97.2% 63.1%
1xfdA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 46.0 3.81e-01 95.0% 94.2%
2k0zA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 34.0 3.81e-01 91.5% 83.6%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 43.0 3.89e-01 89.4% 81.6%
5iz4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 3.62e-01 90.1% 91.1%
2npnA01 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.52 43.0 4.45e-01 89.4% 97.7%
3euaF01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.50 39.0 3.83e-01 100.0% 75.0%
1u3dA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 35.0 3.43e-01 90.1% 63.4%
1h7mA00 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.50 31.0 3.53e-01 84.4% 86.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5009598 7584.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.70 50.0 4.52e-01 73.8% 74.7%
5012088 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.69 46.0 5.12e-01 86.5% 87.3%
3381824 2003.1.1.48 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N 0.68 54.0 4.46e-01 83.7% 65.9%
3836079 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.67 48.0 4.30e-01 73.0% 58.9%
3410973 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.66 47.0 4.18e-01 73.0% 56.9%
3958829 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.66 50.0 4.31e-01 80.1% 70.0%
3569927 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.66 47.0 4.47e-01 73.8% 69.1%
3937989 7573.1.1.4 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.65 60.0 5.19e-01 97.2% 70.7%
3955767 323.1.1.37 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding, Condensation 0.65 46.0 2.67e-01 73.0% 8.6%
3338322 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.64 46.0 4.68e-01 73.8% 77.1%
3388129 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.64 46.0 4.24e-01 73.8% 86.7%
140445 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 46.0 4.88e-01 89.4% 86.0%
10931 7585.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.64 42.0 5.01e-01 80.1% 100.0%
3599315 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.63 46.0 3.61e-01 74.5% 63.8%
4093200 2007.1.2.7 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.63 46.0 4.83e-01 75.9% 86.9%
4329821 2007.1.2.7 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.63 45.0 4.24e-01 73.0% 81.5%
3953734 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.63 45.0 4.33e-01 74.5% 75.2%
3188220 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.62 43.0 3.53e-01 91.5% 38.5%
4182028 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.62 44.0 4.21e-01 71.6% 69.4%
4082706 7588.1.1.1 ↗ a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.62 40.0 4.28e-01 91.5% 75.0%
1252797 2007.1.2.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.62 45.0 4.63e-01 75.9% 85.9%
4115911 7512.1.1.31 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 0.62 40.0 3.73e-01 74.5% 52.0%
3957367 7581.1.1.1 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N 0.61 48.0 4.69e-01 90.8% 75.5%
3975544 2007.1.2.10 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.61 43.0 4.54e-01 73.0% 100.0%
3606194 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.61 45.0 3.91e-01 76.6% 86.5%
3227912 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.60 43.0 4.43e-01 73.8% 78.5%
4189509 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.60 43.0 4.24e-01 74.5% 72.3%
3300825 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.60 46.0 3.89e-01 80.9% 86.3%
3898254 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.60 44.0 4.06e-01 75.9% 61.7%
3990119 2007.1.2.10 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.60 43.0 4.51e-01 75.2% 100.0%
3943963 2007.1.2.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.60 42.0 4.19e-01 73.0% 78.7%
4957980 2484.1.1.341 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Salactin 0.60 48.0 4.47e-01 86.5% 87.2%
2388733 7579.1.1.9 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase 0.59 51.0 4.15e-01 95.0% 87.8%
3487310 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.59 43.0 3.94e-01 74.5% 68.3%
4591272 7573.1.1.1 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.59 50.0 4.86e-01 100.0% 82.6%
5081588 2484.1.1.80 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C 0.59 38.0 4.31e-01 85.8% 90.0%
3784035 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.58 40.0 3.47e-01 70.9% 55.7%
3683483 7585.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.58 42.0 4.76e-01 76.6% 100.0%
4936566 2484.1.1.21 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.57 46.0 3.70e-01 85.8% 71.3%
3945798 7550.1.1.1 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.56 40.0 4.28e-01 90.8% 83.2%
4431536 2007.1.7.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase 0.55 50.0 4.71e-01 98.6% 98.2%
3787768 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 49.0 4.16e-01 98.6% 80.4%
4028846 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 39.0 4.04e-01 72.3% 87.6%
3455115 2002.1.1.96 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans 0.55 46.0 3.59e-01 90.8% 82.9%
4986412 7550.1.1.1 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.54 45.0 4.63e-01 90.1% 99.3%
1187847 2484.1.1.21 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.53 44.0 4.14e-01 87.9% 86.1%
5074897 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 46.0 3.49e-01 95.0% 86.5%
3494475 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.52 46.0 4.08e-01 100.0% 91.9%
1937223 7550.1.1.1 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.52 43.0 4.45e-01 89.4% 97.7%
3302981 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 28.0 3.12e-01 75.2% 66.7%
4943304 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 41.0 3.21e-01 88.7% 92.0%
4029062 2007.25.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 0.51 33.0 3.69e-01 90.8% 87.6%
3963268 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.51 41.0 3.19e-01 87.9% 85.8%
4876648 1137.1.1.1 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.50 42.0 4.25e-01 89.4% 91.3%
4396918 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.50 36.0 3.68e-01 100.0% 75.0%
3342058 7581.1.1.16 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA 0.50 41.0 4.02e-01 90.1% 92.5%
4978361 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.50 43.0 3.32e-01 95.0% 93.7%
D2 high residues 136-205
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5afuV00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.64 46.0 3.54e-01 77.1% 99.4%
6sc4A00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.63 45.0 3.38e-01 75.7% 91.5%
3o2sB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 55.0 4.36e-01 94.3% 97.8%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 44.0 3.78e-01 74.3% 65.1%
3r1wA00 2.160.10.10 Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins 0.61 44.0 3.35e-01 78.6% 91.7%
2fsjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 42.0 3.46e-01 74.3% 54.3%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.60 53.0 4.41e-01 100.0% 77.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 3.43e-01 77.1% 65.7%
4qt4A00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.59 48.0 3.58e-01 91.4% 99.5%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 39.0 3.67e-01 70.0% 94.1%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.57 42.0 3.78e-01 77.1% 57.9%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.56 38.0 4.05e-01 87.1% 81.7%
4gdxA02 1.10.246.130 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.55 45.0 3.89e-01 91.4% 62.2%
2eyqA07 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.54 41.0 3.26e-01 100.0% 39.5%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.53 44.0 3.79e-01 97.1% 72.3%
2w01B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.52 37.0 2.72e-01 74.3% 37.6%
1xa3A01 3.40.50.10540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.52 43.0 2.88e-01 92.9% 30.3%
2eo4A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.52 40.0 3.10e-01 81.4% 57.7%
6c3mA03 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.52 43.0 3.44e-01 91.4% 64.3%
2x49A04 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.52 35.0 3.16e-01 71.4% 85.9%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 46.0 3.82e-01 100.0% 90.2%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.51 41.0 2.72e-01 92.9% 89.8%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.51 41.0 3.72e-01 85.7% 91.5%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.51 37.0 3.36e-01 81.4% 55.6%
1gzsB00 1.10.4120.10 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain 0.51 41.0 3.21e-01 92.9% 73.9%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 36.0 3.23e-01 77.1% 95.2%
6mptA01 3.30.420.590 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.50 34.0 2.60e-01 70.0% 91.7%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.51e-01 82.9% 73.7%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3698206 138.1.1.0 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.70 52.0 5.29e-01 97.1% 80.0%
4287267 3236.2.1.8 ↗ alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › Asp-Al_Ex 0.65 48.0 3.02e-01 77.1% 81.6%
3180179 148.1.1.15 ↗ alpha arrays › Histone-like › Histone-related › Histone › CENP-X 0.65 50.0 4.89e-01 81.4% 97.3%
5049128 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.63 47.0 3.52e-01 80.0% 91.4%
3171568 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.63 55.0 3.76e-01 95.7% 29.8%
5078213 3896.1.2.0 ↗ alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase 0.62 51.0 4.02e-01 91.4% 42.7%
4976489 208.1.1.9 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DCTN5 0.62 45.0 3.37e-01 77.1% 92.6%
5008285 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.61 49.0 3.34e-01 90.0% 96.7%
3439198 192.17.1.0 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like 0.61 35.0 3.68e-01 90.0% 61.5%
3945660 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.60 37.0 3.54e-01 85.7% 51.8%
3655741 7542.1.1.0 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain 0.59 41.0 3.35e-01 71.4% 42.4%
3660749 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.59 41.0 3.28e-01 71.4% 41.5%
5042214 3896.1.1.0 ↗ alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase 0.59 47.0 3.33e-01 90.0% 28.5%
3244401 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 42.0 3.55e-01 75.7% 61.7%
5082662 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.58 46.0 3.39e-01 91.4% 55.7%
3494855 4970.1.1.23 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › ASC 0.57 44.0 3.82e-01 85.7% 78.3%
5013274 5011.1.1.0 ↗ extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa 0.57 39.0 3.70e-01 72.9% 68.2%
3510244 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 39.0 2.98e-01 87.1% 31.2%
4077718 3236.1.1.16 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Asp-Al_Ex 0.56 49.0 3.07e-01 97.1% 86.8%
4243508 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.56 40.0 3.56e-01 75.7% 81.0%
4067008 3236.2.1.8 ↗ alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › Asp-Al_Ex 0.56 47.0 3.01e-01 97.1% 89.6%
4512738 3236.1.1.16 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Asp-Al_Ex 0.56 47.0 3.00e-01 97.1% 89.9%
4985912 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.55 48.0 3.25e-01 100.0% 68.0%
3290892 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 39.0 3.43e-01 82.9% 50.5%
3989794 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.54 48.0 3.22e-01 100.0% 68.0%
3281567 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.54 41.0 3.40e-01 81.4% 64.8%
4986629 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.54 47.0 3.18e-01 100.0% 67.3%
5007460 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.54 43.0 2.97e-01 91.4% 95.7%
3591389 320.4.1.3 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.53 43.0 3.55e-01 88.6% 69.6%
5027310 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.53 43.0 3.89e-01 88.6% 76.8%
3279731 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 37.0 3.39e-01 74.3% 82.1%
3257830 102.1.3.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain 0.53 44.0 3.40e-01 91.4% 88.4%
4503571 223.1.1.83 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_13 0.52 45.0 3.17e-01 100.0% 58.4%