←Back to structures
JQ362498.1__AFF28224.1__PAU_226__00219
Bact-VirJQ362498.1__AFF28224.1__PAU_226__00219
Identity
- Accession:
- JQ362498 ↗
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-72
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 51.0 | 4.06e-01 | 75.8% | 77.9% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 5.49e-01 | 90.9% | 98.3% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 46.0 | 4.35e-01 | 81.8% | 78.8% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.61 | 44.0 | 3.31e-01 | 77.3% | 98.8% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 47.0 | 3.65e-01 | 92.4% | 82.6% |
| 4hn9A02 | 1.20.58.2180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 40.0 | 4.00e-01 | 72.7% | 94.1% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 4.38e-01 | 80.3% | 98.2% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.55 | 41.0 | 4.13e-01 | 81.8% | 83.6% |
| 1rr7A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 36.0 | 3.98e-01 | 74.2% | 100.0% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 44.0 | 3.98e-01 | 98.5% | 83.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4255639 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.62 | 52.0 | 4.87e-01 | 97.0% | 97.6% |
| 3930835 | 108.1.1.1 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 | 0.58 | 40.0 | 4.28e-01 | 72.7% | 94.5% |
| 4057034 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.56 | 42.0 | 4.08e-01 | 83.3% | 74.7% |