←Back to structures

JQ446452.1__AFE86194.1__X__00028

Bact-Vir

JQ446452.1__AFE86194.1__X__00028

Identity

Accession:
JQ446452 ↗
Kingdom:
phage

Quality

76.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Salinovirus› Salinivibrio_phage_CW02

TaxID: 1161935

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-115
PDB
Domain cluster: rep: OP125547.1__UVD32027.1__vBKpnPKlyazma_orf032__00032__D13-77
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zopA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.65 47.0 4.21e-01 77.9% 81.2%
3ctwB00 1.10.8.930 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Protein of unknown function DUF1465 0.65 35.0 3.06e-01 92.2% 34.2%
2pjrA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 43.0 3.90e-01 71.4% 50.9%
1x3kA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 44.0 3.52e-01 71.4% 40.8%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 32.0 3.16e-01 92.2% 44.6%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.63 43.0 3.58e-01 71.4% 44.6%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 44.0 3.15e-01 72.7% 46.8%
2nutB01 1.20.120.730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain 0.63 48.0 3.85e-01 81.8% 64.7%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 43.0 4.44e-01 75.3% 78.7%
2dbaA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 42.0 3.63e-01 74.0% 66.1%
1dd3A01 1.20.5.710 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin 0.58 38.0 4.34e-01 89.6% 91.2%
3llmA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 39.0 2.87e-01 72.7% 29.8%
4e6hA00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 49.0 2.97e-01 100.0% 51.9%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 43.0 4.38e-01 83.1% 94.7%
3c18A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.55 45.0 3.96e-01 90.9% 92.4%
4bwrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 40.0 2.50e-01 77.9% 12.8%
8an5A01 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.53 39.0 2.99e-01 79.2% 77.6%
2pejA00 1.10.1200.210 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX 0.52 41.0 3.60e-01 83.1% 69.7%
2f1kC02 1.10.3660.10 Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain 0.51 42.0 3.80e-01 93.5% 95.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3399891 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 45.0 3.24e-01 72.7% 44.6%
3648990 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.64 42.0 2.55e-01 70.1% 10.7%
3878217 109.4.1.929 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29 0.64 44.0 3.30e-01 72.7% 34.0%
3217001 109.12.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 0.63 48.0 4.69e-01 81.8% 74.1%
3854508 193.1.1.8 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › HOOK_N 0.61 42.0 3.10e-01 71.4% 74.9%
5072325 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.61 41.0 2.86e-01 71.4% 41.8%
3617250 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.60 47.0 4.53e-01 85.7% 83.3%
3931812 3065.1.1.2 ↗ alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Gp-FAR-1 0.59 42.0 3.14e-01 74.0% 69.7%
5032963 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.57 46.0 3.74e-01 92.2% 88.1%
5026152 7579.1.1.13 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH 0.54 41.0 2.83e-01 83.1% 59.9%
3988931 604.39.1.22 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Trep_Strep 0.52 43.0 3.34e-01 96.1% 80.4%
3399010 5059.1.1.5 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA 0.51 42.0 2.81e-01 90.9% 85.3%