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JQ446452.1__AFE86201.1__X__00035

Bact-Vir

JQ446452.1__AFE86201.1__X__00035

Identity

Accession:
JQ446452 ↗
Kingdom:
phage

Quality

71.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Salinovirus› Salinivibrio_phage_CW02

TaxID: 1161935

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 251-323
PDB
Domain cluster: rep: HQ634156.1__AGH32029.1__VPIG_00172__00171__D302-364
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h9oA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.70 57.0 5.04e-01 94.5% 61.1%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 51.0 4.58e-01 80.8% 55.8%
2izvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 51.0 3.93e-01 79.5% 85.9%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 51.0 4.66e-01 83.6% 60.0%
2cs0A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 49.0 4.51e-01 83.6% 60.0%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 49.0 4.47e-01 83.6% 58.0%
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 50.0 4.31e-01 83.6% 51.3%
3ilvA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.63 50.0 3.54e-01 90.4% 62.8%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 49.0 4.25e-01 87.7% 54.4%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 54.0 4.09e-01 98.6% 52.2%
4fbcA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.61 49.0 3.74e-01 89.0% 51.7%
1v6zA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.61 45.0 4.66e-01 79.5% 100.0%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.60 52.0 3.57e-01 98.6% 90.4%
1fu5A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 45.0 3.96e-01 83.6% 53.2%
3g7kA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.59 45.0 3.49e-01 87.7% 64.6%
1uh9A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.59 40.0 3.25e-01 71.2% 80.5%
1lwuC01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.58 42.0 3.41e-01 78.1% 58.3%
3i45A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 46.0 3.59e-01 94.5% 83.3%
1ob8A00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.57 43.0 3.80e-01 86.3% 64.7%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.56 43.0 3.65e-01 87.7% 89.8%
2bbuA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 41.0 3.27e-01 80.8% 46.2%
3ihpA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 40.0 3.52e-01 79.5% 85.3%
2a1vA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 32.0 2.69e-01 87.7% 30.4%
4s39A02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.54 42.0 3.68e-01 93.2% 54.3%
3o0wA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.16e-01 94.5% 63.7%
4l0mA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 41.0 3.05e-01 93.2% 86.4%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.60e-01 87.7% 31.0%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 40.0 2.81e-01 91.8% 54.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3618546 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.75 54.0 4.59e-01 80.8% 47.8%
3506774 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.74 53.0 4.47e-01 80.8% 45.8%
3935139 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.72 52.0 4.18e-01 80.8% 38.6%
3506772 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.71 51.0 4.29e-01 79.5% 44.8%
3854670 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.71 51.0 4.12e-01 83.6% 40.0%
3905730 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.70 49.0 4.19e-01 79.5% 46.1%
3878288 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.70 60.0 5.13e-01 100.0% 59.3%
3623169 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.70 49.0 4.35e-01 80.8% 51.4%
3875325 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 51.0 4.12e-01 83.6% 40.7%
3935342 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 50.0 4.34e-01 83.6% 48.7%
3624597 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.69 50.0 4.50e-01 80.8% 56.0%
3477283 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 51.0 4.61e-01 87.7% 58.0%
3492079 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 51.0 4.70e-01 80.8% 60.8%
3937854 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 51.0 4.60e-01 83.6% 58.0%
3890372 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 51.0 4.51e-01 83.6% 54.5%
3479721 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.67 52.0 4.61e-01 87.7% 56.9%
3414808 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 49.0 4.19e-01 83.6% 47.5%
3619626 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 48.0 4.44e-01 80.8% 58.9%
3995595 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 52.0 4.22e-01 83.6% 49.6%
3496362 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.67 51.0 3.92e-01 83.6% 41.2%
5081359 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.66 51.0 3.93e-01 84.9% 38.2%
3898271 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 49.0 3.95e-01 80.8% 40.5%
5068304 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.65 51.0 4.04e-01 84.9% 43.3%
3579037 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 47.0 4.21e-01 83.6% 54.3%
3941356 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 46.0 3.98e-01 80.8% 46.7%
3509348 214.1.1.15 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063, DUF7145 0.65 57.0 3.81e-01 100.0% 32.3%
3401089 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 51.0 4.25e-01 87.7% 66.9%
5038834 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.64 52.0 4.30e-01 97.3% 48.6%
3298233 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.64 55.0 4.34e-01 97.3% 58.7%
4116968 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.64 51.0 4.09e-01 89.0% 46.0%
3931076 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.64 49.0 4.22e-01 84.9% 53.3%
4993841 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.63 51.0 4.20e-01 89.0% 52.2%
3516794 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.63 47.0 3.85e-01 80.8% 43.6%
3777778 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 55.0 3.83e-01 100.0% 85.5%
3477642 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 52.0 4.44e-01 97.3% 55.8%
3581670 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 46.0 3.88e-01 78.1% 49.6%
3581699 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.62 45.0 3.88e-01 80.8% 48.7%
3517650 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.62 46.0 4.21e-01 87.7% 59.0%
3233988 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 46.0 4.01e-01 80.8% 56.5%
3222713 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 46.0 4.16e-01 79.5% 59.0%
3617276 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 44.0 3.79e-01 80.8% 46.7%
5061935 7575.1.1.4 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.61 51.0 3.35e-01 97.3% 89.0%
5045133 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.61 48.0 3.97e-01 87.7% 48.1%
3583928 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.60 44.0 3.90e-01 80.8% 53.3%
4991801 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.59 47.0 4.03e-01 89.0% 52.0%
5074348 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.59 49.0 4.06e-01 95.9% 50.0%
3243571 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.58 47.0 3.65e-01 95.9% 74.2%
3284879 884.1.1.1 ↗ a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C 0.57 45.0 4.26e-01 90.4% 71.1%
2084081 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.57 46.0 3.09e-01 91.8% 30.1%
5074042 2003.1.7.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › 5-FTHF_cyc-lig 0.57 41.0 3.17e-01 78.1% 32.8%
5052070 7528.1.1.0 ↗ a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains 0.57 40.0 3.67e-01 75.3% 87.0%
1772519 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.56 40.0 2.88e-01 78.1% 35.5%
3229011 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 37.0 3.06e-01 87.7% 35.2%
3625308 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 40.0 3.46e-01 78.1% 45.6%
3518947 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.55 48.0 4.10e-01 97.3% 60.8%
2083983 269.1.1.2 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C,Fib_alpha 0.54 44.0 3.02e-01 94.5% 32.7%
4109302 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.54 41.0 3.73e-01 84.9% 81.0%
3502916 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 37.0 2.98e-01 74.0% 99.4%
5072247 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.53 42.0 2.90e-01 94.5% 47.8%
4190110 269.1.1.2 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C,Fib_alpha 0.53 41.0 2.67e-01 87.7% 24.3%
3486937 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 44.0 3.08e-01 98.6% 35.2%
1088703 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.52 41.0 3.05e-01 93.2% 86.4%
4049264 4099.1.1.26 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.50 40.0 3.48e-01 87.7% 68.4%
D2 high residues 506-576
PDB
D3 medium residues 34-101
PDB
Domain cluster: rep: OX241442.1__CAH9011734.1__VP495E541_P0014__00014__D26-75