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JQ660954.1AFJ96098.1X__00043

Bact-Vir

JQ660954.1__AFJ96098.1__X__00043

Identity

Accession:: JQ660954 ↗
Kingdom:: phage

Quality

95.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_PhiS63

TaxID: 1187894

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-49

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3wnzA03	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.65	46.0	3.28e-01	76.1%	50.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3622966	376.1.1.0 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box	0.70	48.0	5.01e-01	76.1%	82.5%
4959344	109.4.1.202 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16	0.56	41.0	2.63e-01	78.3%	23.2%

D2 high residues 65-151

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3l1nA02	1.20.1280.140	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.70	36.0	3.68e-01	74.7%	49.4%
3plwA00	3.30.40.190	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 ›	0.69	64.0	5.86e-01	100.0%	92.7%
3n3wA00	1.10.1520.10	Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain	0.55	45.0	3.84e-01	97.7%	54.9%
1t07A00	1.10.3880.10	Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX	0.55	41.0	4.24e-01	79.3%	90.1%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2036620	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.93	71.0	6.94e-01	79.3%	73.9%
3588377	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.87	69.0	6.52e-01	81.6%	76.0%
4949181	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.85	64.0	6.85e-01	87.4%	90.7%
5080395	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.83	74.0	6.66e-01	100.0%	71.3%
3839237	378.1.1.0 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases	0.79	73.0	5.79e-01	100.0%	53.5%
5080086	378.1.1.0 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases	0.77	57.0	5.98e-01	81.6%	83.7%
5073918	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.74	61.0	5.94e-01	90.8%	80.0%
3976723	378.1.1.28 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG	0.71	58.0	5.11e-01	97.7%	60.8%
3963335	378.1.1.9 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2	0.69	63.0	5.45e-01	98.9%	76.7%
3944337	378.1.1.28 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG	0.67	58.0	4.99e-01	94.3%	60.7%
4964156	378.1.1.9 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2	0.66	60.0	5.44e-01	98.9%	81.7%