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JQ691611.1__AFH21061.1__CR9_177__00177
Bact-VirJQ691611.1__AFH21061.1__CR9_177__00177
Identity
- Accession:
- JQ691611 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Taxonomy
TaxID: 1162290
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-59
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g6zA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 42.0 | 3.67e-01 | 74.5% | 42.9% |
| 4ktbA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 41.0 | 2.82e-01 | 76.6% | 72.5% |
| 3zqsA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.55 | 42.0 | 3.58e-01 | 89.4% | 59.1% |
| 3nznA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 37.0 | 2.88e-01 | 72.3% | 50.5% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 41.0 | 2.64e-01 | 87.2% | 19.6% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 3.13e-01 | 100.0% | 29.6% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.53 | 39.0 | 2.96e-01 | 83.0% | 75.6% |
| 1dzaA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.52 | 42.0 | 3.29e-01 | 100.0% | 66.7% |
| 4mboA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 3.20e-01 | 100.0% | 56.3% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.52 | 38.0 | 2.89e-01 | 83.0% | 73.0% |
| 2gmhA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 2.77e-01 | 100.0% | 55.2% |
| 3p2hA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 2.66e-01 | 87.2% | 54.9% |
| 3aluA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.51 | 40.0 | 2.95e-01 | 97.9% | 89.8% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.24e-01 | 87.2% | 83.0% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 39.0 | 3.26e-01 | 100.0% | 44.3% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 31.0 | 3.08e-01 | 100.0% | 52.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035835 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.83 | 47.0 | 4.30e-01 | 74.5% | 45.0% |
| 4261006 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.78 | 46.0 | 3.15e-01 | 76.6% | 18.1% |
| 4969429 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.66 | 37.0 | 2.51e-01 | 76.6% | 14.4% |
| 3659314 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.64 | 45.0 | 2.64e-01 | 74.5% | 10.3% |
| 4033455 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.62 | 44.0 | 3.01e-01 | 76.6% | 92.1% |
| 3621732 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 41.0 | 3.41e-01 | 100.0% | 62.9% |
| 3279680 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.52 | 42.0 | 2.72e-01 | 100.0% | 26.9% |
| 4224368 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.52 | 36.0 | 3.24e-01 | 74.5% | 50.0% |
| 3924752 | 2003.1.2.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › ETFQO_UQ-bd | 0.52 | 45.0 | 2.58e-01 | 100.0% | 37.5% |
| None | — | 0.51 | 44.0 | 2.57e-01 | 100.0% | 37.9% | |
| 4446469 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.50 | 40.0 | 3.21e-01 | 100.0% | 55.7% |
| 2468539 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.50 | 39.0 | 3.18e-01 | 95.7% | 62.6% |
| 3940689 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.50 | 43.0 | 2.99e-01 | 100.0% | 40.0% |
| 4160866 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.50 | 43.0 | 3.51e-01 | 100.0% | 51.1% |
| 4541281 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.50 | 38.0 | 3.04e-01 | 91.5% | 44.5% |