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JQ768459.1__AFH14567.1__Lu11_0036__00036
Bact-VirJQ768459.1__AFH14567.1__Lu11_0036__00036
Identity
- Accession:
- JQ768459 ↗
- Kingdom:
- phage
Quality
67.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-97
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2np2A00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.74 | 63.0 | 4.99e-01 | 94.1% | 80.4% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 3.91e-01 | 84.3% | 46.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3668680 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.76 | 68.0 | 5.42e-01 | 100.0% | 63.0% |
| 4328415 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.71 | 54.0 | 4.59e-01 | 82.4% | 50.6% |
| 4943354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 50.0 | 4.40e-01 | 84.3% | 51.9% |
| 3698371 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.66 | 38.0 | 3.85e-01 | 70.6% | 56.0% |
| 3636754 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.64 | 48.0 | 4.26e-01 | 84.3% | 53.8% |
| 4061695 | 101.1.2.293 ↗ | alpha arrays › HTH › HTH › winged helix domain › IncFII_repA | 0.62 | 55.0 | 3.73e-01 | 100.0% | 100.0% |
| 3253225 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.60 | 53.0 | 4.44e-01 | 98.0% | 96.5% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 44.0 | 3.63e-01 | 84.3% | 40.0% |
| 5032453 | 102.1.2.38 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › PF29425 | 0.59 | 44.0 | 2.84e-01 | 92.2% | 17.9% |
| 4947451 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.57 | 43.0 | 2.82e-01 | 94.1% | 19.1% |
| 5049330 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.57 | 42.0 | 3.11e-01 | 84.3% | 30.1% |
| 3273602 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.53 | 39.0 | 3.90e-01 | 82.4% | 96.4% |
| 3681932 | 185.1.1.2 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › LTP_2 | 0.51 | 41.0 | 3.28e-01 | 92.2% | 43.6% |