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JQ768459.1__AFH14658.1__Lu11_0126__00127
Bact-VirJQ768459.1__AFH14658.1__Lu11_0126__00127
Identity
- Accession:
- JQ768459 ↗
- Kingdom:
- phage
Quality
67.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-95
D2
medium
residues 96-173
Domain cluster:
rep: KY499642.1__AQT28023.1__pVa21_082__00082__D3-66
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 50.0 | 5.63e-01 | 80.8% | 100.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.68 | 54.0 | 5.49e-01 | 91.0% | 87.0% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.68 | 52.0 | 5.41e-01 | 82.1% | 98.6% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 5.20e-01 | 78.2% | 93.5% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.65 | 53.0 | 5.32e-01 | 87.2% | 98.7% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 49.0 | 5.13e-01 | 80.8% | 91.7% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.64 | 42.0 | 3.94e-01 | 84.6% | 54.6% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.64 | 53.0 | 4.80e-01 | 89.7% | 80.8% |
| 2z84A00 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.64 | 51.0 | 3.76e-01 | 87.2% | 41.0% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.64 | 43.0 | 4.31e-01 | 85.9% | 67.5% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 38.0 | 4.46e-01 | 70.5% | 85.7% |
| 1crmA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.63 | 44.0 | 3.11e-01 | 74.4% | 54.7% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.62 | 41.0 | 3.79e-01 | 85.9% | 53.6% |
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.62 | 38.0 | 3.90e-01 | 82.1% | 63.6% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.62 | 42.0 | 4.35e-01 | 84.6% | 73.3% |
| 2k3yA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 4.18e-01 | 83.3% | 87.0% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 36.0 | 4.44e-01 | 73.1% | 93.9% |
| 1yvuA02 | 2.30.340.10 | Mainly Beta › Roll › PAZ domain fold › PAZ domain superfamily | 0.58 | 45.0 | 4.29e-01 | 84.6% | 97.8% |
| 2lktA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 49.0 | 4.22e-01 | 94.9% | 95.2% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 50.0 | 4.46e-01 | 96.2% | 96.3% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 40.0 | 4.19e-01 | 73.1% | 80.3% |
| 3dlbB03 | 2.170.260.50 | Mainly Beta › Beta Complex › paz domain › | 0.56 | 44.0 | 4.30e-01 | 85.9% | 97.7% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 46.0 | 4.35e-01 | 87.2% | 95.6% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 42.0 | 4.17e-01 | 84.6% | 75.6% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 43.0 | 4.57e-01 | 85.9% | 98.5% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 44.0 | 4.09e-01 | 88.5% | 93.0% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 44.0 | 4.21e-01 | 87.2% | 97.8% |
| 3mcaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 43.0 | 3.81e-01 | 89.7% | 82.2% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.53 | 41.0 | 3.51e-01 | 85.9% | 77.4% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.53 | 41.0 | 3.88e-01 | 85.9% | 99.0% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.84e-01 | 83.3% | 100.0% |
| 4m00A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.62e-01 | 76.9% | 82.6% |
| 2k5wA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.51 | 37.0 | 3.34e-01 | 76.9% | 85.6% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 39.0 | 3.89e-01 | 84.6% | 93.9% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 59.0 | 7.07e-01 | 84.6% | 98.2% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 58.0 | 6.81e-01 | 89.7% | 100.0% |
| 3264806 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 51.0 | 6.27e-01 | 82.1% | 100.0% |
| 3598284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 51.0 | 5.93e-01 | 85.9% | 92.7% |
| 4665407 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.77 | 49.0 | 5.89e-01 | 84.6% | 100.0% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.76 | 50.0 | 5.77e-01 | 84.6% | 94.5% |
| 5004050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 5.62e-01 | 89.7% | 81.4% |
| 4680376 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.76 | 49.0 | 5.67e-01 | 87.2% | 92.7% |
| 4534931 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.76 | 48.0 | 4.93e-01 | 83.3% | 66.7% |
| 4516378 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 50.0 | 5.27e-01 | 88.5% | 75.7% |
| 4585317 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 49.0 | 5.69e-01 | 84.6% | 94.5% |
| 4265943 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.71 | 58.0 | 3.81e-01 | 87.2% | 25.4% |
| 4064452 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.70 | 50.0 | 4.07e-01 | 87.2% | 41.4% |
| 4974669 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.70 | 49.0 | 4.69e-01 | 87.2% | 63.3% |
| 5017637 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.69 | 47.0 | 5.45e-01 | 82.1% | 100.0% |
| 3504246 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.68 | 60.0 | 4.74e-01 | 97.4% | 80.6% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.67 | 54.0 | 5.52e-01 | 85.9% | 94.7% |
| 3475919 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.67 | 59.0 | 3.94e-01 | 100.0% | 90.2% |
| 3918373 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.67 | 57.0 | 4.66e-01 | 93.6% | 61.5% |
| 3928760 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.67 | 52.0 | 3.31e-01 | 83.3% | 24.2% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.66 | 55.0 | 5.60e-01 | 89.7% | 98.7% |
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.66 | 55.0 | 5.11e-01 | 89.7% | 74.7% |
| 3846130 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.66 | 57.0 | 4.13e-01 | 93.6% | 37.1% |
| 3853598 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.65 | 57.0 | 5.67e-01 | 93.6% | 91.3% |
| 3181439 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 53.0 | 4.73e-01 | 87.2% | 90.7% |
| 4965721 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 54.0 | 4.77e-01 | 91.0% | 99.1% |
| 3451280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 54.0 | 4.35e-01 | 92.3% | 94.2% |
| 3941729 | 4.1.1.157 ↗ | beta barrels › SH3 › SH3 › SH3 › YdfZ | 0.65 | 46.0 | 5.10e-01 | 85.9% | 96.7% |
| 3902990 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.65 | 57.0 | 5.42e-01 | 94.9% | 84.4% |
| 3939870 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 4.71e-01 | 94.9% | 83.8% |
| 4258307 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 53.0 | 3.59e-01 | 88.5% | 33.2% |
| 4029263 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.65 | 56.0 | 4.85e-01 | 94.9% | 71.7% |
| 4025294 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.65 | 55.0 | 5.30e-01 | 93.6% | 95.6% |
| 3754343 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.64 | 56.0 | 5.70e-01 | 94.9% | 100.0% |
| 3652661 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.64 | 53.0 | 4.47e-01 | 89.7% | 100.0% |
| 3593976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 55.0 | 4.61e-01 | 93.6% | 66.2% |
| 3399965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 53.0 | 5.05e-01 | 89.7% | 80.0% |
| 4937423 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 5.24e-01 | 91.0% | 87.1% |
| 3585474 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 4.92e-01 | 93.6% | 82.9% |
| 3660755 | 4.8.1.21 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor | 0.63 | 55.0 | 5.62e-01 | 93.6% | 100.0% |
| 3234035 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.63 | 58.0 | 4.96e-01 | 100.0% | 71.7% |
| 3185323 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.63 | 56.0 | 5.01e-01 | 100.0% | 70.0% |
| 3360171 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.63 | 55.0 | 4.55e-01 | 96.2% | 63.8% |
| 3236474 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 50.0 | 3.31e-01 | 87.2% | 29.9% |
| 3982999 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.63 | 55.0 | 5.10e-01 | 96.2% | 87.0% |
| 3499855 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 5.22e-01 | 88.5% | 98.7% |
| 4026033 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 45.0 | 4.05e-01 | 85.9% | 53.6% |
| 3931577 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 49.0 | 3.35e-01 | 84.6% | 33.9% |
| 1175108 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.63 | 50.0 | 4.43e-01 | 85.9% | 67.9% |
| 3636251 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.62 | 57.0 | 4.89e-01 | 100.0% | 74.2% |
| 3470175 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.62 | 51.0 | 5.12e-01 | 88.5% | 97.5% |
| 3650711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 5.04e-01 | 84.6% | 92.0% |
| 4123369 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.62 | 48.0 | 4.59e-01 | 83.3% | 91.1% |
| 4195869 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.61 | 55.0 | 4.53e-01 | 100.0% | 60.7% |
| 3639629 | 4.1.1.312 ↗ | beta barrels › SH3 › SH3 › SH3 › Med13_N | 0.61 | 50.0 | 3.85e-01 | 87.2% | 72.7% |
| 4012213 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.28e-01 | 85.9% | 85.2% |
| 3363360 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.61 | 54.0 | 5.24e-01 | 97.4% | 89.4% |
| 3382832 | 4.1.1.302 ↗ | beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O | 0.59 | 51.0 | 3.83e-01 | 93.6% | 81.7% |
| 4989950 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 47.0 | 4.11e-01 | 85.9% | 82.6% |
| 4528015 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.56 | 46.0 | 3.52e-01 | 93.6% | 66.2% |
| None | — | 0.55 | 49.0 | 3.16e-01 | 97.4% | 57.9% | |
| 3253595 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.54 | 42.0 | 3.50e-01 | 88.5% | 84.5% |
| 4948817 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.54 | 44.0 | 2.84e-01 | 89.7% | 69.3% |
| 4381865 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.54 | 44.0 | 3.95e-01 | 89.7% | 88.2% |
| 3204703 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 41.0 | 3.00e-01 | 83.3% | 80.0% |
| 3294376 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.53 | 44.0 | 4.22e-01 | 88.5% | 97.8% |
| 4027927 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.53 | 43.0 | 4.05e-01 | 87.2% | 96.8% |
| 3785031 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.53 | 38.0 | 2.97e-01 | 79.5% | 35.8% |
| 4525954 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 43.0 | 3.96e-01 | 88.5% | 93.0% |
| 1807482 | 59.1.1.1 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RPC5 | 0.52 | 38.0 | 3.11e-01 | 79.5% | 65.9% |
| 3661144 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.50 | 40.0 | 2.69e-01 | 88.5% | 71.3% |