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JQ768459.1__AFH14664.1__Lu11_0130__00133

Bact-Vir

JQ768459.1__AFH14664.1__Lu11_0130__00133

Identity

Accession:
JQ768459 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_Lu11

TaxID: 1161927

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-105
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.73 41.0 4.82e-01 86.0% 77.6%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 34.0 4.25e-01 92.5% 80.0%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.66 48.0 5.25e-01 97.8% 95.9%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 33.0 3.62e-01 92.5% 70.7%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.51 36.0 3.49e-01 94.6% 65.4%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3215090 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 48.0 5.54e-01 92.5% 96.9%
2502895 2.27.1.0 ↗ beta barrels › OB-fold 0.71 47.0 5.12e-01 100.0% 83.1%
3230022 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 50.0 5.64e-01 94.6% 97.1%
3243150 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 49.0 5.43e-01 94.6% 90.7%
3213991 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 48.0 5.44e-01 94.6% 95.7%
4602887 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 49.0 5.39e-01 94.6% 94.6%
3505867 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.62 42.0 4.51e-01 95.7% 86.7%
426155 2.24.1.1 ↗ beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 0.61 43.0 4.82e-01 95.7% 97.2%
3202298 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 48.0 4.24e-01 95.7% 84.3%
3319527 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.55 49.0 4.04e-01 100.0% 77.1%
3337634 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.55 50.0 4.16e-01 100.0% 81.2%
3346721 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.55 43.0 3.90e-01 84.9% 86.9%
4429397 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.55 45.0 3.72e-01 90.3% 78.2%
4025827 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 49.0 3.81e-01 100.0% 62.5%
5049571 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.53 41.0 3.83e-01 91.4% 64.7%
3288239 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.52 43.0 4.05e-01 96.8% 73.0%
4270966 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 35.0 3.79e-01 90.3% 86.7%
3304389 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 46.0 3.22e-01 100.0% 40.7%
D2 medium residues 128-193
PDB