←Back to structures
JQ768459.1__AFH14740.1__Lu11_0203__00209
Bact-VirJQ768459.1__AFH14740.1__Lu11_0203__00209
Identity
- Accession:
- JQ768459 ↗
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-125
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 36.0 | 4.73e-01 | 70.2% | 93.8% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 40.0 | 4.25e-01 | 100.0% | 77.0% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 25.0 | 3.77e-01 | 75.4% | 100.0% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 33.0 | 3.84e-01 | 99.1% | 86.8% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.55 | 34.0 | 3.90e-01 | 92.1% | 85.5% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 34.0 | 3.91e-01 | 96.5% | 89.7% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 32.0 | 3.54e-01 | 89.5% | 72.5% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.53 | 36.0 | 3.00e-01 | 100.0% | 38.2% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 36.0 | 3.27e-01 | 89.5% | 53.6% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 33.0 | 3.57e-01 | 93.0% | 77.7% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 32.0 | 3.44e-01 | 92.1% | 73.2% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.51 | 36.0 | 3.57e-01 | 100.0% | 68.9% |
| 1vqwA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 38.0 | 2.81e-01 | 81.6% | 70.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214131 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 37.0 | 4.37e-01 | 100.0% | 80.0% |
| 3622425 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.60 | 37.0 | 3.71e-01 | 100.0% | 59.2% |
| 3721062 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.60 | 34.0 | 3.90e-01 | 84.2% | 74.1% |
| 5053933 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 31.0 | 3.93e-01 | 95.6% | 87.7% |
| 1891431 | 9.1.1.28 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Pallilysin | 0.59 | 36.0 | 3.49e-01 | 89.5% | 55.2% |
| 4446834 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 32.0 | 3.25e-01 | 86.0% | 55.8% |
| 4085451 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 33.0 | 3.40e-01 | 87.7% | 60.0% |
| 3937047 | 9.1.1.55 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 | 0.54 | 38.0 | 3.77e-01 | 87.7% | 67.5% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.52 | 41.0 | 3.47e-01 | 100.0% | 52.2% |
| 4237578 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.50 | 31.0 | 3.12e-01 | 88.6% | 58.3% |
| 4998346 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.50 | 33.0 | 3.16e-01 | 90.4% | 56.9% |