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JQ806764.1__AFM54419.1__AMBK_31__00031

Bact-Vir

JQ806764.1__AFM54419.1__AMBK_31__00031

Identity

Accession:
JQ806764 ↗
Kingdom:
phage

Quality

94.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_vB_SosS_Oslo

TaxID: 1168549

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-75
PDB
Domain cluster: rep: KY271401.1__ARB15774.1__X__00003__D10-78
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00717.29 best Peptidase_S24 65.8 4.10e-18 96.0% 59.5%
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ay9A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 1.00 97.0 8.26e-01 100.0% 68.5%
1jheA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.91 85.0 7.01e-01 100.0% 61.3%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.90 86.0 7.56e-01 100.0% 78.2%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.90 86.0 7.08e-01 100.0% 62.2%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.83 70.0 5.98e-01 93.2% 58.4%
1b12C01 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.80 74.0 6.19e-01 100.0% 71.1%
4k8wA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.72 57.0 4.88e-01 85.1% 92.4%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.28e-01 78.4% 71.6%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.60e-01 75.7% 93.5%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.11e-01 75.7% 82.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 48.0 4.89e-01 83.8% 82.2%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 44.0 4.60e-01 73.0% 86.4%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.63 53.0 4.52e-01 97.3% 67.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 43.0 4.59e-01 73.0% 81.8%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.97e-01 75.7% 100.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 4.37e-01 74.3% 76.8%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.12e-01 82.4% 67.6%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 52.0 4.27e-01 100.0% 66.2%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 3.86e-01 73.0% 84.4%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 4.45e-01 78.4% 87.5%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.59 39.0 4.25e-01 71.6% 100.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 4.19e-01 70.3% 82.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.29e-01 73.0% 87.7%
1r5bA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 40.0 3.60e-01 74.3% 73.6%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 38.0 3.69e-01 70.3% 58.8%
3gt2A00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.57 47.0 3.97e-01 94.6% 91.1%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.57 40.0 3.38e-01 75.7% 78.9%
2d9rA00 2.40.30.100 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like 0.56 41.0 3.90e-01 77.0% 100.0%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 40.0 3.65e-01 78.4% 66.0%
2fivA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 38.0 3.33e-01 74.3% 66.4%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 39.0 3.70e-01 79.7% 63.0%
3fm8A00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 36.0 3.36e-01 70.3% 81.6%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.54 38.0 3.20e-01 77.0% 70.1%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 43.0 3.29e-01 95.9% 81.6%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 3.14e-01 79.7% 72.3%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 36.0 2.81e-01 75.7% 97.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945057 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.97 93.0 7.47e-01 100.0% 58.4%
4447540 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.94 89.0 6.90e-01 100.0% 51.7%
3973676 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.93 89.0 7.21e-01 100.0% 61.3%
4034190 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.91 84.0 6.70e-01 95.9% 54.6%
4036705 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.91 87.0 6.87e-01 100.0% 55.6%
4331428 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.91 86.0 6.74e-01 100.0% 55.0%
4034335 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.90 81.0 6.94e-01 94.6% 63.6%
4607208 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.90 83.0 6.79e-01 100.0% 58.5%
3164339 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.90 85.0 6.45e-01 100.0% 50.6%
4075150 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.89 85.0 5.99e-01 100.0% 39.0%
4007999 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.88 82.0 6.56e-01 100.0% 56.3%
3965029 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.87 81.0 6.39e-01 100.0% 54.3%
3963450 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.86 80.0 6.44e-01 100.0% 57.8%
3970039 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.86 80.0 6.33e-01 100.0% 57.9%
3963760 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.84 77.0 6.12e-01 100.0% 54.5%
2772566 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.84 71.0 5.99e-01 93.2% 57.9%
4259069 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 77.0 5.50e-01 100.0% 39.0%
4525683 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.82 70.0 5.84e-01 93.2% 56.8%
1323508 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.81 74.0 5.95e-01 100.0% 86.2%
3942297 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.78 66.0 5.65e-01 93.2% 59.3%
3974846 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.78 71.0 6.19e-01 100.0% 70.9%
3976863 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.77 65.0 5.72e-01 93.2% 63.8%
5037939 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 71.0 5.47e-01 100.0% 51.6%
5067286 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.76 70.0 6.54e-01 100.0% 84.3%
3290509 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.76 69.0 6.43e-01 100.0% 81.1%
5066224 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.74 67.0 6.26e-01 100.0% 87.8%
5064457 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.72 47.0 4.90e-01 70.3% 71.4%
4147290 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.72 51.0 5.44e-01 75.7% 84.6%
4090116 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 45.0 4.66e-01 73.0% 72.1%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 46.0 5.21e-01 73.0% 94.5%
4432348 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 52.0 5.42e-01 82.4% 98.5%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.66 47.0 5.02e-01 75.7% 86.2%
4261492 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.65 55.0 4.63e-01 97.3% 80.0%
3659149 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.35e-01 81.1% 86.7%
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.64 45.0 4.96e-01 77.0% 98.2%
4151014 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 46.0 5.01e-01 77.0% 100.0%
5057445 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 46.0 4.40e-01 78.4% 71.8%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.62 44.0 4.87e-01 75.7% 100.0%
3968842 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 53.0 4.53e-01 100.0% 84.6%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.60e-01 70.3% 96.4%
3642926 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 51.0 3.89e-01 94.6% 55.7%
4150042 1.1.8.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB 0.61 45.0 4.21e-01 77.0% 70.0%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 44.0 4.34e-01 77.0% 81.2%
4990290 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.60 40.0 4.05e-01 73.0% 69.3%
5058340 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.60 37.0 3.87e-01 75.7% 67.1%
3688604 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.60 44.0 3.98e-01 79.7% 58.1%
5055336 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.59 42.0 3.94e-01 74.3% 71.1%
3597932 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.59 42.0 3.92e-01 75.7% 76.8%
3913687 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 48.0 4.59e-01 94.6% 85.6%
4084190 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.58 42.0 4.52e-01 75.7% 96.6%
4927036 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.58 42.0 4.04e-01 77.0% 65.9%
3699413 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.58 41.0 3.65e-01 74.3% 74.3%
3286961 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.57 48.0 3.94e-01 97.3% 56.6%
4318415 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 40.0 3.75e-01 75.7% 61.1%
4952455 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.56 41.0 3.90e-01 78.4% 68.5%
4288082 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.56 38.0 3.60e-01 70.3% 87.8%
5016579 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 38.0 3.78e-01 77.0% 69.6%
5063794 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.53 37.0 3.66e-01 75.7% 67.5%